RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SURF4O15260 269 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ALOX15BO15296 676 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 KIF5CO60282 957 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CYTIPO60759 359 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 N4BP1O75113 896 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 HPRP00739 348 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CRYABP02511 175 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 IVLP07476 585 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 PLEKP08567 350 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 TSPY4P0CV99 314 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 TSPY10P0CW01 314 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 EZRP15311 586 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 PGCP20142 388 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 TBXA2RP21731 343 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CD1BP29016 333 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 PPP2R1AP30153 589 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 PRDX2P32119 198 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 OR3A2P47893 321 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 FMO5P49326 533 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 MNAT1P51948 309 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 HNRNPFP52597 415 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 AP3M2P53677 418 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 LIM2P55344 173 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 BACE1P56817 501 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 BEX3Q00994 111 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ANKDD1AQ495B1 522 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SLC25A47Q6Q0C1 308 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CBLN3Q6UW01 205 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 DHRS11Q6UWP2 260 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 TMEM207Q6UWW9 146 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CEACAM20Q6UY09 585 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ADAMTSL5Q6ZMM2 481 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 LUZP1Q86V48 1076 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 NBPF5PQ86XG9 351 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ERO1BQ86YB8 467 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 LACC1Q8IV20 430 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CDK20Q8IZL9 346 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CENPLQ8N0S6 344 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 DNAJC22Q8N4W6 341 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 DHRSXQ8N5I4 330 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 GBP7Q8N8V2 638 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CCDC63Q8NA47 563 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 FNDC8Q8TC99 324 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ZDHHC19Q8WVZ1 309 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 METTL21AQ8WXB1 218 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 OSTF1Q92882 214 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 GLYATL1Q969I3 302 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 TOP1MTQ969P6 601 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 EXOSC8Q96B26 276 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF524Q96C55 264 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 CNRIP1Q96F85 164 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 BTBD9Q96Q07 612 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF300Q96RE9 604 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 COQ7Q99807 217 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 FAM173AQ9BQD7 235 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 GON7Q9BXV9 100 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 FGFBP2Q9BYJ0 223 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 PPDPFQ9H3Y8 114 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF385DQ9H6B1 395 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 VCPKMTQ9H867 229 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 COQ10BQ9H8M1 238 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ZDHHC11Q9H8X9 412 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 HPS4Q9NQG7 708 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 YAE1D1Q9NRH1 226 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 MAN2C1Q9NTJ4 1040 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ACTR3BQ9P1U1 418 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 PEF1Q9UBV8 284 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 MGAT4BQ9UQ53 548 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 EXOSC1Q9Y3B2 195 aaKnown RBP0.88□□□□□ -2.27
HIF1A-204ENST00000539097 AP4B1Q9Y6B7 739 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 USP6P35125 1406 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 ATP10DQ9P241 1426 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 TTC37Q6PGP7 1564 aa0.88□□□□□ -2.27
HIF1A-204ENST00000539097 SH3TC1Q8TE82 1336 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 PTPRMP28827 1452 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 GSTTP1A0A1W2PQM5 241 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 YJEFN3A6XGL0 299 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 PP2D1A8MPX8 630 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 LMO7DNF2Z398 122 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SLC1A7O00341 560 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 HMMRO75330 724 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 TM7SF2O76062 418 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 NOL4O94818 638 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 DUS4LO95620 317 aaKnown RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 AGTP01019 485 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 NR3C1P04150 777 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ATP1B1P05026 303 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CRYGCP07315 174 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CFC1BP0CG36 223 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CFC1P0CG37 223 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SNHG28P0DPA3 235 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CETPP11597 493 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CCDC130P13994 396 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 ZNF26P17031 533 aaPredicted RBP0.87□□□□□ -2.27
HIF1A-204ENST00000539097 CCR1P32246 355 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SOX3P41225 446 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SLC6A12P48065 614 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 SRPXP78539 464 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 HSF2Q03933 536 aa0.87□□□□□ -2.27
HIF1A-204ENST00000539097 TRDNQ13061 729 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms