RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 KRTCAP2Q8N6L1 136 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 FNDC5Q8NAU1 212 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 FAM110BQ8TC76 370 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 OMA1Q96E52 524 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 ZBED6CLQ96FA7 236 aaPredicted RBP12.57□□□□□ -0.4
CD9-208ENST00000538834 TMEM41AQ96HV5 264 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 NODALQ96S42 347 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 C1orf50Q9BV19 199 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 ACKR4Q9NPB9 350 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 NOP53Q9NZM5 478 aaKnown RBP12.57□□□□□ -0.4
CD9-208ENST00000538834 NPIPA1Q9UND3 350 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 OSGIN2Q9Y236 505 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 HRH3Q9Y5N1 445 aa12.57□□□□□ -0.4
CD9-208ENST00000538834 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.57□□□□□ -0.4
CD9-208ENST00000538834 KIAA1549Q9HCM3 1950 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 HMGB1P1B2RPK0 211 aaPredicted RBP12.56□□□□□ -0.4
CD9-208ENST00000538834 B4DXG7 233 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 TP53I11O14683 189 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 SLC19A2O60779 497 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 ABCB7O75027 752 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 COQ9O75208 318 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 NKX2-2O95096 273 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 SNX4O95219 450 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 RFPL3SP0C7P2 107 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 CDK9P50750 372 aaKnown RBP12.56□□□□□ -0.4
CD9-208ENST00000538834 PPIAP62937 165 aaKnown RBP12.56□□□□□ -0.4
CD9-208ENST00000538834 PHC1P78364 1004 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 ELOAQ14241 798 aaKnown RBP12.56□□□□□ -0.4
CD9-208ENST00000538834 CYP27C1Q4G0S4 372 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 EMC4Q5J8M3 183 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 ATG16L1Q676U5 607 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 FAM47EQ6ZV65 393 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 SLC22A16Q86VW1 577 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 WDR75Q8IWA0 830 aaKnown RBP12.56□□□□□ -0.4
CD9-208ENST00000538834 PRR22Q8IZ63 422 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 FAM109AQ8N4B1 249 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 OR4N2Q8NGD1 307 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 OR8J2Q8NGG1 315 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 CDC26Q8NHZ8 85 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 SSC4DQ8WTU2 575 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 TESCQ96BS2 214 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 C7orf26Q96N11 449 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 PAIP2Q9BPZ3 127 aaKnown RBP12.56□□□□□ -0.4
CD9-208ENST00000538834 NUF2Q9BZD4 464 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 BHLHE41Q9C0J9 482 aaPredicted RBP12.56□□□□□ -0.4
CD9-208ENST00000538834 TSPAN10Q9H1Z9 355 aaPredicted RBP12.56□□□□□ -0.4
CD9-208ENST00000538834 ZNF703Q9H7S9 590 aaPredicted RBP12.56□□□□□ -0.4
CD9-208ENST00000538834 ZFP64Q9NPA5 681 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 ARGLU1Q9NWB6 273 aaPredicted RBP12.56□□□□□ -0.4
CD9-208ENST00000538834 ZNF446Q9NWS9 450 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 NKIRAS1Q9NYS0 192 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 SH3BP4Q9P0V3 963 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 MAPRE3Q9UPY8 281 aa12.56□□□□□ -0.4
CD9-208ENST00000538834 EIF3LQ9Y262 564 aaKnown RBP12.56□□□□□ -0.4
CD9-208ENST00000538834 A0A1B0GUH1 482 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 SLCO1B7G3V0H7 640 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 G3V3Y1 287 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 SUSD5O60279 629 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 LBPP18428 481 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 GAB1Q13480 694 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 NNATQ16517 81 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 PRAMEF20Q5VT98 475 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 AP1ARQ63HQ0 302 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 BICRALQ6AI39 1079 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 SLC30A6Q6NXT4 461 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 ZCCHC12Q6PEW1 402 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 TRILQ7L0X0 811 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 DOLPP1Q86YN1 238 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 FAM13CQ8NE31 585 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 ZFP28Q8NHY6 868 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 MGARPQ8TDB4 240 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 OR5P2Q8WZ92 322 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 DIO2Q92813 273 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 TMBIM1Q969X1 311 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 DMRTA2Q96SC8 542 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 GIN1Q9NXP7 522 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 GPR45Q9Y5Y3 372 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 ADGRG4Q8IZF6 3080 aa12.55□□□□□ -0.4
CD9-208ENST00000538834 CACNA1DQ01668 2161 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 CELSR2Q9HCU4 2923 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 A0A1B0GTH9 108 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 A0A1W2PRB8 838 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 TFECO14948 347 aaPredicted RBP12.54□□□□□ -0.4
CD9-208ENST00000538834 LRRTM2O43300 516 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 EMC8O43402 210 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 FADS1O60427 444 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 ICOSLGO75144 302 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 HPNP05981 417 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 CELA3AP09093 270 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 DDX5P17844 614 aaKnown RBP12.54□□□□□ -0.4
CD9-208ENST00000538834 ENDOUP21128 410 aaKnown RBP12.54□□□□□ -0.4
CD9-208ENST00000538834 PTPN6P29350 595 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 HPCAL1P37235 193 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 MAGEA5P43359 124 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 ZFP36L2P47974 494 aaKnown RBP12.54□□□□□ -0.4
CD9-208ENST00000538834 MAN2A2P49641 1150 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 MANFP55145 182 aaKnown RBP12.54□□□□□ -0.4
CD9-208ENST00000538834 HSF1Q00613 529 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 HSPB3Q12988 150 aa12.54□□□□□ -0.4
CD9-208ENST00000538834 C3AR1Q16581 482 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms