RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 SOHLH2Q9NX45 425 aa13.84□□□□□ -0.19
ATL3-203ENST00000538786 LRIT1Q9P2V4 623 aa13.84□□□□□ -0.19
ATL3-203ENST00000538786 CDC14AQ9UNH5 594 aa13.84□□□□□ -0.19
ATL3-203ENST00000538786 IFT52Q9Y366 437 aa13.84□□□□□ -0.19
ATL3-203ENST00000538786 RNF215Q9Y6U7 377 aa13.84□□□□□ -0.19
ATL3-203ENST00000538786 GOLGA4Q13439 2230 aaKnown RBP13.83□□□□□ -0.2
ATL3-203ENST00000538786 HYKKA2RU49 373 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 FAM20BO75063 409 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 ZBTB11O95625 1053 aaPredicted RBP13.83□□□□□ -0.2
ATL3-203ENST00000538786 ALOX5P09917 674 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 PCMT1P22061 227 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 ALDH4A1P30038 563 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 GSSP48637 474 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 CRISP1P54107 249 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 PTGES3Q15185 160 aaKnown RBP13.83□□□□□ -0.2
ATL3-203ENST00000538786 TCTE1Q5JU00 501 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 TYW3Q6IPR3 259 aaKnown RBP13.83□□□□□ -0.2
ATL3-203ENST00000538786 MAMSTRQ6ZN01 415 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 P3H2Q8IVL5 708 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 DEFB123Q8N688 67 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 ZNF540Q8NDQ6 660 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 ZFAND2BQ8WV99 257 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 MUL1Q969V5 352 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 MPP4Q96JB8 637 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 STACQ99469 402 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 SDF2Q99470 211 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 DOK1Q99704 481 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 CCDC90BQ9GZT6 254 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 CACYBPQ9HB71 228 aaKnown RBP13.83□□□□□ -0.2
ATL3-203ENST00000538786 MAN2C1Q9NTJ4 1040 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 KLHL28Q9NXS3 571 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 HCN3Q9P1Z3 774 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 ERVK-18Q9QC07 812 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 FTSJ1Q9UET6 329 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 MKLN1Q9UL63 735 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 SATB2Q9UPW6 733 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 MRPS33Q9Y291 106 aaKnown RBP13.83□□□□□ -0.2
ATL3-203ENST00000538786 WDR45Q9Y484 360 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 CSNK1G3Q9Y6M4 447 aa13.83□□□□□ -0.2
ATL3-203ENST00000538786 ZAR1LA6NP61 321 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 NUDT21O43809 227 aaKnown RBP13.82□□□□□ -0.2
ATL3-203ENST00000538786 OR10H2O60403 315 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 TRMUO75648 421 aaKnown RBP13.82□□□□□ -0.2
ATL3-203ENST00000538786 CT62P0C5K7 136 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 OSMP13725 252 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 CHMP24386 653 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 PCSK6P29122 969 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 IDH2P48735 452 aaKnown RBP13.82□□□□□ -0.2
ATL3-203ENST00000538786 UGT2B15P54855 530 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 CDC42P60953 191 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 INAVAQ3KP66 663 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 GPR107Q5VW38 600 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 NKAIN2Q5VXU1 208 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 PGBD2Q6P3X8 592 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 PODNL1Q6PEZ8 512 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 ERI1Q8IV48 349 aaKnown RBP13.82□□□□□ -0.2
ATL3-203ENST00000538786 PEX5LQ8IYB4 626 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 OR6C4Q8NGE1 309 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 DOK4Q8TEW6 326 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 ZNF350Q9GZX5 532 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 LHPPQ9H008 270 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 PLCXD1Q9NUJ7 323 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 REV1Q9UBZ9 1251 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 ZNF232Q9UNY5 417 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 CHST2Q9Y4C5 530 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 TDRD6O60522 2096 aaKnown RBP13.82□□□□□ -0.2
ATL3-203ENST00000538786 A0A1B0GVT2 93 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 FITM1A5D6W6 292 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 CTNSO60931 367 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 MAP3K8P41279 467 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 FNTBP49356 437 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 EMX1Q04741 257 aaPredicted RBP13.82□□□□□ -0.2
ATL3-203ENST00000538786 MAP4K2Q12851 820 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 SLC13A2Q13183 592 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 DUSP8Q13202 625 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 EXOSC7Q15024 291 aaKnown RBP13.82□□□□□ -0.2
ATL3-203ENST00000538786 DCST2Q5T1A1 773 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 ZNF595Q8IYB9 648 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 CARFQ8N187 725 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 VWA5B2Q8N398 1253 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 C12orf43Q96C57 262 aaKnown RBP13.82□□□□□ -0.2
ATL3-203ENST00000538786 PEX11GQ96HA9 241 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 AHCYL2Q96HN2 611 aaKnown RBP13.82□□□□□ -0.2
ATL3-203ENST00000538786 IRAK4Q9NWZ3 460 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 IMPAD1Q9NX62 359 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 ZNF226Q9NYT6 803 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 TMEM9Q9P0T7 183 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 ZNF443Q9Y2A4 671 aaPredicted RBP13.82□□□□□ -0.2
ATL3-203ENST00000538786 GPR55Q9Y2T6 319 aaPredicted RBP13.82□□□□□ -0.2
ATL3-203ENST00000538786 PCDHGA10Q9Y5H3 936 aa13.82□□□□□ -0.2
ATL3-203ENST00000538786 TMEM131Q92545 1883 aa13.81□□□□□ -0.2
ATL3-203ENST00000538786 AGAP5A6NIR3 686 aa13.81□□□□□ -0.2
ATL3-203ENST00000538786 RGS10O43665 173 aa13.81□□□□□ -0.2
ATL3-203ENST00000538786 TPST2O60704 377 aa13.81□□□□□ -0.2
ATL3-203ENST00000538786 COQ9O75208 318 aa13.81□□□□□ -0.2
ATL3-203ENST00000538786 STX11O75558 287 aa13.81□□□□□ -0.2
ATL3-203ENST00000538786 SOX30O94993 753 aa13.81□□□□□ -0.2
ATL3-203ENST00000538786 AK1P00568 194 aa13.81□□□□□ -0.2
ATL3-203ENST00000538786 THBS1P07996 1170 aa13.81□□□□□ -0.2
ATL3-203ENST00000538786 GABRB1P18505 474 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms