RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 SATB2Q9UPW6 733 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 RNF6Q9Y252 685 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 PCDH15Q96QU1 1955 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 PTGES3LE9PB15 166 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 PCDHGA12O60330 932 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 OR10H3O60404 316 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 FCMRO60667 390 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 CT62P0C5K7 136 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 AVPR1BP47901 424 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 UGT2B15P54855 530 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 SLC13A2Q13183 592 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 EXOSC7Q15024 291 aaKnown RBP19.05■□□□□ 0.64
DDX55-205ENST00000538744 NPTX1Q15818 432 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 LYSMD4Q5XG99 296 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 TYW3Q6IPR3 259 aaKnown RBP19.05■□□□□ 0.64
DDX55-205ENST00000538744 CLVS1Q8IUQ0 354 aaPredicted RBP19.05■□□□□ 0.64
DDX55-205ENST00000538744 SLC35F3Q8IY50 421 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 PEX5LQ8IYB4 626 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 DEPDC4Q8N2C3 294 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 LINC00471Q8N535 108 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 FAM81AQ8TBF8 368 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 ZG16BQ96DA0 208 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 PEX11GQ96HA9 241 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 SDF2Q99470 211 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 RBCK1Q9BYM8 510 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 CXorf21Q9HAI6 301 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 PAK1IP1Q9NWT1 392 aaPredicted RBP19.05■□□□□ 0.64
DDX55-205ENST00000538744 AASSQ9UDR5 926 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 MKLN1Q9UL63 735 aa19.05■□□□□ 0.64
DDX55-205ENST00000538744 SH3PXD2BA1X283 911 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 FITM1A5D6W6 292 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 DUX1O43812 170 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 CTNSO60931 367 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 COQ9O75208 318 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 GLB1P16278 677 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 GPR3P46089 330 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 GSSP48637 474 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 SH3BGRP55822 239 aaPredicted RBP19.04■□□□□ 0.64
DDX55-205ENST00000538744 MAP4K2Q12851 820 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 XAF1Q6GPH4 301 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 LAIR1Q6GTX8 287 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 ALDH16A1Q8IZ83 802 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 VWA5B2Q8N398 1253 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 COX18Q8N8Q8 333 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 SLC7A13Q8TCU3 470 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 UCK2Q9BZX2 261 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 DUSP21Q9H596 190 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 ZNF232Q9UNY5 417 aa19.04■□□□□ 0.64
DDX55-205ENST00000538744 ZNF443Q9Y2A4 671 aaPredicted RBP19.04■□□□□ 0.64
DDX55-205ENST00000538744 CLDN4O14493 209 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 FAM20BO75063 409 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 WBP4O75554 376 aaKnown RBP19.03■□□□□ 0.64
DDX55-205ENST00000538744 AK1P00568 194 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 GNSP15586 552 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 KRT20P35900 424 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 PEX19P40855 299 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 DHPSP49366 369 aaPredicted RBP19.03■□□□□ 0.64
DDX55-205ENST00000538744 ARRB1P49407 418 aaPredicted RBP19.03■□□□□ 0.64
DDX55-205ENST00000538744 EMP3P54852 163 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 CSNK2BP67870 215 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 STX4Q12846 297 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 GRM7Q14831 915 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 LARS2Q15031 903 aaKnown RBP19.03■□□□□ 0.64
DDX55-205ENST00000538744 DCST2Q5T1A1 773 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 PLXDC1Q8IUK5 500 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 MAFAQ8NHW3 353 aaPredicted RBP19.03■□□□□ 0.64
DDX55-205ENST00000538744 UBE2FQ969M7 185 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 MMABQ96EY8 250 aaPredicted RBP19.03■□□□□ 0.64
DDX55-205ENST00000538744 CNDP2Q96KP4 475 aaKnown RBP19.03■□□□□ 0.64
DDX55-205ENST00000538744 ELF4Q99607 663 aaPredicted RBP19.03■□□□□ 0.64
DDX55-205ENST00000538744 DGCR6LQ9BY27 220 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 ZNF350Q9GZX5 532 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 SPRTNQ9H040 489 aaPredicted RBP19.03■□□□□ 0.64
DDX55-205ENST00000538744 CCNB1IP1Q9NPC3 277 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 PRTFDC1Q9NRG1 225 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 FTSJ1Q9UET6 329 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 TNRC6BQ9UPQ9 1833 aaKnown RBP19.03■□□□□ 0.64
DDX55-205ENST00000538744 ZNF701M0R085 212 aaPredicted RBP19.03■□□□□ 0.64
DDX55-205ENST00000538744 HRO43593 1189 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 AHCYL1O43865 530 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 STX11O75558 287 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 CRISP1P54107 249 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 SLC35A2P78381 396 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 IGLV3-21P80748 117 aaPredicted RBP19.03■□□□□ 0.64
DDX55-205ENST00000538744 MAT1AQ00266 395 aaKnown RBP19.03■□□□□ 0.64
DDX55-205ENST00000538744 PIGFQ07326 219 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 PGBD2Q6P3X8 592 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 PODNL1Q6PEZ8 512 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 GALNT12Q8IXK2 581 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 ZNF619Q8N2I2 560 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 APH1BQ8WW43 257 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 CCDC90BQ9GZT6 254 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 MAN2C1Q9NTJ4 1040 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 CHST2Q9Y4C5 530 aa19.03■□□□□ 0.64
DDX55-205ENST00000538744 H0YIG0 161 aa19.02■□□□□ 0.63
DDX55-205ENST00000538744 MRPS14O60783 128 aaKnown RBP19.02■□□□□ 0.63
DDX55-205ENST00000538744 SOX30O94993 753 aa19.02■□□□□ 0.63
DDX55-205ENST00000538744 CBX7O95931 251 aa19.02■□□□□ 0.63
DDX55-205ENST00000538744 THBS1P07996 1170 aa19.02■□□□□ 0.63
DDX55-205ENST00000538744 GIMD1P0DJR0 217 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms