RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 DPP4P27487 766 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 LOXP28300 417 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 CRABP2P29373 138 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 KIR2DL2P43627 348 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 MAPK12P53778 367 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 ALDH18A1P54886 795 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 TPD52P55327 224 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 DUSP2Q05923 314 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 MAP4K2Q12851 820 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 TRMT12Q53H54 448 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 GRTP1Q5TC63 336 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 SLC48A1Q6P1K1 146 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 C3orf62Q6ZUJ4 267 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 CENPLQ8N0S6 344 aaPredicted RBP12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 L3MBTL4Q8NA19 623 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 MAPK1IP1LQ8NDC0 245 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 TMEM171Q8WVE6 324 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 KLHL29Q96CT2 875 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 ADOQ96SZ5 270 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 KLHL4Q9C0H6 718 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 NOL11Q9H8H0 719 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 PSD3Q9NYI0 1048 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 ELOVL5Q9NYP7 299 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 CPSF2Q9P2I0 782 aaKnown RBP12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 ZNF639Q9UID6 485 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 PCDHA9Q9Y5H5 950 aa12.64□□□□□ -0.39
SMARCA4-206ENST00000538456 PRR14LQ5THK1 2151 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 ABCA1O95477 2261 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 FRG2CA6NGY1 282 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 OR6C70A6NIJ9 312 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 RNF212BA8MTL3 300 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 B4DXG7 233 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 SEC14L5O43304 696 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 CLDN9O95484 217 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 CSNK2A2P19784 350 aaPredicted RBP12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 DRD5P21918 477 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 PPICP45877 212 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 PCYT1AP49585 367 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 EMDP50402 254 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 ATP5J2P56134 94 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 CORO7P57737 925 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 B3GALT5-AS1P59052 145 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 KRTAP1-1Q07627 177 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 TNK1Q13470 666 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 EXOC3L2Q2M3D2 409 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 SGO1Q5FBB7 561 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 TTC19Q6DKK2 380 aaPredicted RBP12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 PAGE2Q7Z2X7 111 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 COMMD6Q7Z4G1 85 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 MEIOBQ8N635 442 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 ZNF610Q8N9Z0 462 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 OR4K17Q8NGC6 315 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 OR52B6Q8NGF0 335 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 RHEBL1Q8TAI7 183 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 ATP6V1E2Q96A05 226 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 DTNBP1Q96EV8 351 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 PINK1Q9BXM7 581 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 DPH5Q9H2P9 285 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 ANKRA2Q9H9E1 313 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 PRODH2Q9UF12 536 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 ADAM29Q9UKF5 820 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 CES1P1Q9UKY3 287 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 ACOT9Q9Y305 439 aa12.63□□□□□ -0.39
SMARCA4-206ENST00000538456 CR1P17927 2039 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 C1orf226A1L170 272 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 OR7A17O14581 309 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 TO15178 435 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 CGAP01215 116 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 IL12BP29460 328 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 KRT20P35900 424 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 ALDH9A1P49189 494 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 CLDN15P56746 228 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 DMTNQ08495 405 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 BCL2A1Q16548 175 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 FAM83EQ2M2I3 478 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 RAET1LQ5VY80 246 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 FRG2Q64ET8 278 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 ZNF704Q6ZNC4 412 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 LARP4Q71RC2 724 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 CREG2Q8IUH2 290 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 OR5M1Q8NGP8 315 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 FNDC9Q8TBE3 224 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 IGFBPL1Q8WX77 278 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 FRG2BQ96QU4 278 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 CXorf56Q9H5V9 222 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 AHSPQ9NZD4 102 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 PROCRQ9UNN8 238 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 GPR55Q9Y2T6 319 aaPredicted RBP12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 PCNX3Q9H6A9 2034 aa12.62□□□□□ -0.39
SMARCA4-206ENST00000538456 NBEAL1Q6ZS30 2694 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 A0A087X1B8 175 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 UQCRHLA0A096LP55 91 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 RNF223E7ERA6 249 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 H3BML4 177 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 EMC8O43402 210 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 SCO2O43819 266 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 ABCB7O75027 752 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 GUCY1B2O75343 617 aa12.61□□□□□ -0.39
SMARCA4-206ENST00000538456 PLAUP00749 431 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms