RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 FCMRO60667 390 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 SORBS2O94875 1100 aaKnown RBP6.74□□□□□ -1.33
MSH6-209ENST00000538136 ALDOCP09972 364 aaKnown RBP6.74□□□□□ -1.33
MSH6-209ENST00000538136 ITGAMP11215 1152 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 DRD4P21917 467 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 IL10P22301 178 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 ZNF41P51814 821 aaPredicted RBP6.74□□□□□ -1.33
MSH6-209ENST00000538136 CDK6Q00534 326 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 CD47Q08722 323 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 TRIP10Q15642 601 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 TBCELQ5QJ74 424 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 PLA2G2CQ5R387 149 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 GLYATQ6IB77 296 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 OGFOD3Q6PK18 319 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 SLITRK4Q8IW52 837 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 CA13Q8N1Q1 262 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 D2HGDHQ8N465 521 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 C10orf82Q8WW14 230 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 CYGBQ8WWM9 190 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 NR1H4Q96RI1 486 aaPredicted RBP6.74□□□□□ -1.33
MSH6-209ENST00000538136 SORT1Q99523 831 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 FNDC11Q9BVV2 318 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 SYNPO2LQ9H987 977 aa6.74□□□□□ -1.33
MSH6-209ENST00000538136 LYARQ9NX58 379 aaKnown RBP6.74□□□□□ -1.33
MSH6-209ENST00000538136 FOXS1O43638 330 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 SERPINB7O75635 380 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 LIPCP11150 499 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 BMP5P22003 454 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 ACP1P24666 158 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 SLC6A12P48065 614 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 TMED10P49755 219 aaKnown RBP6.73□□□□□ -1.33
MSH6-209ENST00000538136 PSMD4P55036 377 aaKnown RBP6.73□□□□□ -1.33
MSH6-209ENST00000538136 WNT3P56703 355 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 RAB38P57729 211 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 AP2B1P63010 937 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 SPIBQ01892 262 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 TNFRSF17Q02223 184 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 DMPKQ09013 629 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 OR1C1Q15619 314 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 TMEM176BQ3YBM2 270 aaPredicted RBP6.73□□□□□ -1.33
MSH6-209ENST00000538136 ZNF385BQ569K4 471 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 CDCP2Q5VXM1 449 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 RHBDD2Q6NTF9 364 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 CYS1Q717R9 158 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 C11orf65Q8NCR3 313 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 RBM15BQ8NDT2 890 aaKnown RBP6.73□□□□□ -1.33
MSH6-209ENST00000538136 ADAMTS14Q8WXS8 1223 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 ARMC7Q9H6L4 198 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 PILRAQ9UKJ1 303 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 TP53TG5Q9Y2B4 290 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 A0A1W2PNR3 127 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 ELOA3DA6NLF2 546 aaPredicted RBP6.73□□□□□ -1.33
MSH6-209ENST00000538136 ACOT7O00154 380 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 CTNSO60931 367 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 RSL1D1O76021 490 aaKnown RBP6.73□□□□□ -1.33
MSH6-209ENST00000538136 DDAH2O95865 285 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 CT62P0C5K7 136 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 CAPN3P20807 821 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 RPL3P39023 403 aaKnown RBP6.73□□□□□ -1.33
MSH6-209ENST00000538136 ETV4P43268 484 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 CDH12P55289 794 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 EMX2Q04743 252 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 SCARB2Q14108 478 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 SERTAD2Q14140 314 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 NRF1Q16656 503 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 ELOA3BQ3SY89 546 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 WIPI1Q5MNZ9 446 aaPredicted RBP6.73□□□□□ -1.33
MSH6-209ENST00000538136 REP15Q6BDI9 236 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 KIRREL2Q6UWL6 708 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 VTCN1Q7Z7D3 282 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 TREML1Q86YW5 311 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 PARP8Q8N3A8 854 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 BHLHE22Q8NFJ8 381 aaPredicted RBP6.73□□□□□ -1.33
MSH6-209ENST00000538136 ELOA3Q8NG57 546 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 OR7G2Q8NG99 324 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 OR2Y1Q8NGV0 311 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 ZNF483Q8TF39 744 aaPredicted RBP6.73□□□□□ -1.33
MSH6-209ENST00000538136 PHF10Q8WUB8 498 aaKnown RBP6.73□□□□□ -1.33
MSH6-209ENST00000538136 EME1Q96AY2 570 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 ART5Q96L15 291 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 C10orf90Q96M02 699 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 EFHD1Q9BUP0 239 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 NTMT1Q9BV86 223 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 TAPBPLQ9BX59 468 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 ZNF768Q9H5H4 540 aaKnown RBP6.73□□□□□ -1.33
MSH6-209ENST00000538136 FBXO34Q9NWN3 711 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 TPD52L2O43399 206 aaKnown RBP6.73□□□□□ -1.33
MSH6-209ENST00000538136 SUV39H1O43463 412 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 TLX3O43711 291 aaPredicted RBP6.73□□□□□ -1.33
MSH6-209ENST00000538136 WDPCPO95876 746 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 SLC22A10Q63ZE4 541 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 ZNF730Q6ZMV8 503 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 ARMC8Q8IUR7 673 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 RELL1Q8IUW5 271 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 ANKFN1Q8N957 763 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 C9orf43Q8TAL5 461 aaPredicted RBP6.73□□□□□ -1.33
MSH6-209ENST00000538136 HSPBAP1Q96EW2 488 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 ZNF607Q96SK3 696 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 CXorf36Q9H7Y0 433 aa6.73□□□□□ -1.33
MSH6-209ENST00000538136 ZNF556Q9HAH1 456 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms