RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 CLEC4CQ8WTT0 213 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 MAL2Q969L2 176 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 MYO9AB2RTY4 2548 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 GGT3PA6NGU5 568 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 LY86O95711 162 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 SERPINA7P05543 415 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 RHOQP17081 205 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 CSNK2A2P19784 350 aaPredicted RBP5.4□□□□□ -1.54
CSMD1-215ENST00000537824 SLAMF1Q13291 335 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 NOXRED1Q6NXP6 359 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 COX15Q7KZN9 410 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 RETREG3Q86VR2 466 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 SIAH3Q8IW03 269 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 NPAS3Q8IXF0 933 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 NPRL2Q8WTW4 380 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 CRAMP1Q96RY5 1269 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 NSUN3Q9H649 340 aaKnown RBP5.4□□□□□ -1.54
CSMD1-215ENST00000537824 NT5DC2Q9H857 520 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 NOX3Q9HBY0 568 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 FBXL2Q9UKC9 423 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 PCCBP05166 539 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 CSF1P09603 554 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 CTSEP14091 401 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 CBLP22681 906 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 SHMT2P34897 504 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 SLC25A11Q02978 314 aaKnown RBP5.4□□□□□ -1.54
CSMD1-215ENST00000537824 TMPRSS7Q7RTY8 843 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 TRIM46Q7Z4K8 759 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 LAX1Q8IWV1 398 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 OR56B4Q8NH76 319 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 PROKR1Q8TCW9 393 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 BRIX1Q8TDN6 353 aaKnown RBP5.4□□□□□ -1.54
CSMD1-215ENST00000537824 GIMAP1Q8WWP7 306 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 ADIPOR1Q96A54 375 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 SAP130Q9H0E3 1048 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 MYEF2Q9P2K5 600 aaKnown RBP5.4□□□□□ -1.54
CSMD1-215ENST00000537824 DIP2CQ9Y2E4 1556 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 TMEM72A0PK05 275 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 TSPAN11A1L157 253 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 ZNF587BE7ETH6 402 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 BLOC1S5-TXNDC5H3BN57 136 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 I6L893 689 aaPredicted RBP5.4□□□□□ -1.54
CSMD1-215ENST00000537824 YY2O15391 372 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 B4GALT4O60513 344 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 GGT1P19440 569 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 OC90Q02509 493 aaPredicted RBP5.4□□□□□ -1.54
CSMD1-215ENST00000537824 UNC50Q53HI1 259 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 C7orf61Q8IZ16 206 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 RHOXF1Q8NHV9 184 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 SEC61A2Q9H9S3 476 aa5.4□□□□□ -1.54
CSMD1-215ENST00000537824 TCRBV3S1A0A5B6 114 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 FABP7O15540 132 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 GJB1P08034 283 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 CFL1P23528 166 aaKnown RBP5.4□□□□□ -1.55
CSMD1-215ENST00000537824 GABRB3P28472 473 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 P2RX3P56373 397 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 ZC3H14Q6PJT7 736 aaKnown RBP5.4□□□□□ -1.55
CSMD1-215ENST00000537824 UNQ6126/PRO20091Q6UXV3 157 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 RELL1Q8IUW5 271 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 BCL7CQ8WUZ0 217 aaPredicted RBP5.4□□□□□ -1.55
CSMD1-215ENST00000537824 FAM46BQ96A09 425 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 MCHR1Q99705 422 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 TXN2Q99757 166 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 GPR52Q9Y2T5 361 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 ZNF175Q9Y473 711 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 CCDC168Q8NDH2 2452 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 C20orf202A1L168 122 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 STK17BO94768 372 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 SLC35E2BP0CK96 405 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 BPIP17213 487 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 PGGT1BP53609 377 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 APOBEC3HQ6NTF7 200 aaKnown RBP5.4□□□□□ -1.55
CSMD1-215ENST00000537824 SEMA6DQ8NFY4 1073 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 OR2T33Q8NG76 320 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 OR9Q2Q8NGE9 314 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 SUSD6Q92537 303 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 PDCD2LQ9BRP1 358 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 SPATC1LQ9H0A9 340 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 TNFRSF10BO14763 440 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 MATN3O15232 486 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 FBXO24O75426 580 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 CPT2P23786 658 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 BIDP55957 195 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 GAS6Q14393 721 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 VAMP3Q15836 100 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 BTN2A3PQ96KV6 586 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 JSRP1Q96MG2 331 aaPredicted RBP5.4□□□□□ -1.55
CSMD1-215ENST00000537824 PCBD2Q9H0N5 130 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 GTF2IRD1Q9UHL9 959 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 WNK3Q9BYP7 1800 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 SOX30O94993 753 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 NME1P15531 152 aaKnown RBP5.4□□□□□ -1.55
CSMD1-215ENST00000537824 MTNR1AP48039 350 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 CAV2P51636 162 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 CCR6P51684 374 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 TAS2R31P59538 309 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 LRRC73Q5JTD7 316 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 C6orf136Q5SQH8 315 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 SIAH1Q8IUQ4 282 aa5.4□□□□□ -1.55
CSMD1-215ENST00000537824 IL17RDQ8NFM7 739 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms