RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 ARSIQ5FYB1 569 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 HACD4Q5VWC8 232 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 PRAMEF8Q5VWM4 474 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 PRAMEF7Q5VXH5 474 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 LIPIQ6XZB0 460 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 GLCCI1Q86VQ1 547 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 NUDT13Q86X67 352 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 ELMOD2Q8IZ81 293 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 SLC37A3Q8NCC5 494 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 SUN3Q8TAQ9 357 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 NEIL3Q8TAT5 605 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 SMG7Q92540 1137 aaKnown RBP11.43□□□□□ -0.58
CPSF7-218ENST00000537641 OTUB2Q96DC9 234 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 ZNF514Q96K75 400 aaPredicted RBP11.43□□□□□ -0.58
CPSF7-218ENST00000537641 GPA33Q99795 319 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 PLA2G12AQ9BZM1 189 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 RNF32Q9H0A6 362 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 PIGUQ9H490 435 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 ANKRD19PQ9H560 264 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 RERGLQ9H628 205 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 ATP13A2Q9NQ11 1180 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 MED17Q9NVC6 651 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 MARK1Q9P0L2 795 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 MALT1Q9UDY8 824 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 IL36AQ9UHA7 158 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 SYT5O00445 386 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 IGHA1P01876 353 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 NR2F1P10589 423 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 KELP23276 732 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 SOX18P35713 384 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 AVPR1BP47901 424 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 REEP5Q00765 189 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 ZNF155Q12901 538 aaPredicted RBP11.43□□□□□ -0.58
CPSF7-218ENST00000537641 LY6G5CQ5SRR4 150 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 PLPP4Q5VZY2 271 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 ZNF57Q68EA5 555 aaPredicted RBP11.43□□□□□ -0.58
CPSF7-218ENST00000537641 TMEM64Q6YI46 380 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 COMTD1Q86VU5 262 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 C9orf62Q8N4C0 152 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 SFXN5Q8TD22 340 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 SLC9A6Q92581 669 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 DTD2Q96FN9 168 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 GPR137Q96N19 417 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 AIF1LQ9BQI0 150 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 TEX12Q9BXU0 123 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 PITHD1Q9GZP4 211 aaPredicted RBP11.43□□□□□ -0.58
CPSF7-218ENST00000537641 GALNT9Q9HCQ5 603 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 WASH6PQ9NQA3 447 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 LIPT1Q9Y234 373 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 HSPB11Q9Y547 144 aa11.43□□□□□ -0.58
CPSF7-218ENST00000537641 LOC102723532A0A0G2JNH3 316 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 TEX51A0A1B0GUA7 166 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 A0A1W2PQ72 361 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 FAM170BA6NMN3 283 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 RFPL3O75679 317 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 EPPINO95925 133 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 TBX6O95947 436 aaPredicted RBP11.42□□□□□ -0.58
CPSF7-218ENST00000537641 ERGP11308 486 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 ACADLP28330 430 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 SLC6A1P30531 599 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 IFNA8P32881 189 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 NNMTP40261 264 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 MTNR1BP49286 362 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 VASPP50552 380 aaPredicted RBP11.42□□□□□ -0.58
CPSF7-218ENST00000537641 TRAM2Q15035 370 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 AADACL4Q5VUY2 407 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 TMEM215Q68D42 235 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 ZNF765Q7L2R6 523 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 TRMT11Q7Z4G4 463 aaKnown RBP11.42□□□□□ -0.58
CPSF7-218ENST00000537641 C17orf64Q86WR6 236 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 LRRC28Q86X40 367 aaPredicted RBP11.42□□□□□ -0.58
CPSF7-218ENST00000537641 TRAPPC5Q8IUR0 188 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 OR8D4Q8NGM9 314 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 OR6T1Q8NGN1 323 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 UCN3Q969E3 161 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 RAD51AP1Q96B01 352 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 EXOSC8Q96B26 276 aaKnown RBP11.42□□□□□ -0.58
CPSF7-218ENST00000537641 KCTD12Q96CX2 325 aaKnown RBP11.42□□□□□ -0.58
CPSF7-218ENST00000537641 SENP5Q96HI0 755 aaPredicted RBP11.42□□□□□ -0.58
CPSF7-218ENST00000537641 MRGPRX3Q96LB0 322 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 COQ10AQ96MF6 247 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 CITED4Q96RK1 184 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 DCLRE1CQ96SD1 692 aaKnown RBP11.42□□□□□ -0.58
CPSF7-218ENST00000537641 ZDHHC5Q9C0B5 715 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 LINC00597Q9H2U6 94 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 EGLN3Q9H6Z9 239 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 EMC7Q9NPA0 242 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 EXTL2Q9UBQ6 330 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 NCKAP1Q9Y2A7 1128 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 NINQ8N4C6 2090 aa11.42□□□□□ -0.58
CPSF7-218ENST00000537641 A0A087WUU8 490 aa11.41□□□□□ -0.58
CPSF7-218ENST00000537641 A0A0G2JPF8 293 aa11.41□□□□□ -0.58
CPSF7-218ENST00000537641 C7orf66A4D0T2 115 aa11.41□□□□□ -0.58
CPSF7-218ENST00000537641 LINC00862A6NCI5 91 aa11.41□□□□□ -0.58
CPSF7-218ENST00000537641 HNRNPCL2B2RXH8 293 aa11.41□□□□□ -0.58
CPSF7-218ENST00000537641 HNRNPCL3B7ZW38 293 aa11.41□□□□□ -0.58
CPSF7-218ENST00000537641 LRRTM2O43300 516 aa11.41□□□□□ -0.58
CPSF7-218ENST00000537641 AKR7A2O43488 359 aa11.41□□□□□ -0.58
CPSF7-218ENST00000537641 RGS9O75916 674 aaPredicted RBP11.41□□□□□ -0.58
CPSF7-218ENST00000537641 APOL3O95236 402 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms