RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 ALOX5P09917 674 aa22.43■■□□□ 1.18
HMGA2-208ENST00000537429 ETFAP13804 333 aa22.43■■□□□ 1.18
HMGA2-208ENST00000537429 C16orf47Q6ZP98 133 aaPredicted RBP22.43■■□□□ 1.18
HMGA2-208ENST00000537429 CCDC121Q6ZUS5 278 aa22.43■■□□□ 1.18
HMGA2-208ENST00000537429 SNRNP27Q8WVK2 155 aaKnown RBP22.43■■□□□ 1.18
HMGA2-208ENST00000537429 CMTM6Q9NX76 183 aa22.43■■□□□ 1.18
HMGA2-208ENST00000537429 FRG2CA6NGY1 282 aa22.42■■□□□ 1.18
HMGA2-208ENST00000537429 HMGN4O00479 90 aa22.42■■□□□ 1.18
HMGA2-208ENST00000537429 OR12D1P0DN82 309 aa22.42■■□□□ 1.18
HMGA2-208ENST00000537429 BMP2P12643 396 aa22.42■■□□□ 1.18
HMGA2-208ENST00000537429 GABRA3P34903 492 aa22.42■■□□□ 1.18
HMGA2-208ENST00000537429 KHKP50053 298 aa22.42■■□□□ 1.18
HMGA2-208ENST00000537429 ANXA11P50995 505 aaKnown RBP22.42■■□□□ 1.18
HMGA2-208ENST00000537429 CCL11P51671 97 aa22.42■■□□□ 1.18
HMGA2-208ENST00000537429 NR0B1P51843 470 aaKnown RBP22.42■■□□□ 1.18
HMGA2-208ENST00000537429 NNATQ16517 81 aa22.42■■□□□ 1.18
HMGA2-208ENST00000537429 RPS19BP1Q86WX3 136 aaKnown RBP22.42■■□□□ 1.18
HMGA2-208ENST00000537429 SLC44A2Q8IWA5 706 aaPredicted RBP22.42■■□□□ 1.18
HMGA2-208ENST00000537429 SLC5A8Q8N695 610 aa22.42■■□□□ 1.18
HMGA2-208ENST00000537429 SPAG4Q9NPE6 437 aa22.42■■□□□ 1.18
HMGA2-208ENST00000537429 ABCD2Q9UBJ2 740 aa22.42■■□□□ 1.18
HMGA2-208ENST00000537429 KCNE3Q9Y6H6 103 aa22.42■■□□□ 1.18
HMGA2-208ENST00000537429 DOCK10Q96BY6 2186 aa22.42■■□□□ 1.18
HMGA2-208ENST00000537429 TO15178 435 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 TNFRSF21O75509 655 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 DNAJB5O75953 348 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 SLC7A2P52569 658 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 FCRLBQ6BAA4 426 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 DEFB107AQ8IZN7 70 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 SIRT6Q8N6T7 355 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 GPR151Q8TDV0 419 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 RAB8BQ92930 207 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 HSPBAP1Q96EW2 488 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 CDCP1Q9H5V8 836 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 Q9N2J8 555 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 TMEM181Q9P2C4 612 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 WWP2O00308 870 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 ACOX3O15254 700 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 AGR2O95994 175 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 RASSF2P50749 326 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 MLF1P58340 268 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 DSTNP60981 165 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 RAPSNQ13702 412 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 PIGGQ5H8A4 983 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 B3GNTL1Q67FW5 361 aaPredicted RBP22.41■■□□□ 1.18
HMGA2-208ENST00000537429 OR4N2Q8NGD1 307 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 OR10A6Q8NH74 314 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 APOBEC4Q8WW27 367 aaKnown RBP22.41■■□□□ 1.18
HMGA2-208ENST00000537429 XAGE5Q8WWM1 108 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 PIK3R3Q92569 461 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 CDS1Q92903 461 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 ECSITQ9BQ95 431 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 L3MBTL1Q9Y468 752 aa22.41■■□□□ 1.18
HMGA2-208ENST00000537429 NME4O00746 187 aa22.4■■□□□ 1.18
HMGA2-208ENST00000537429 MAN1A2O60476 641 aa22.4■■□□□ 1.18
HMGA2-208ENST00000537429 ZNF354AO60765 605 aaPredicted RBP22.4■■□□□ 1.18
HMGA2-208ENST00000537429 NADKO95544 446 aaPredicted RBP22.4■■□□□ 1.18
HMGA2-208ENST00000537429 TRHRP34981 398 aaPredicted RBP22.4■■□□□ 1.18
HMGA2-208ENST00000537429 GZMMP51124 257 aa22.4■■□□□ 1.18
HMGA2-208ENST00000537429 CYP27C1Q4G0S4 372 aa22.4■■□□□ 1.18
HMGA2-208ENST00000537429 SERPINA11Q86U17 422 aa22.4■■□□□ 1.18
HMGA2-208ENST00000537429 CALHM3Q86XJ0 350 aa22.4■■□□□ 1.18
HMGA2-208ENST00000537429 COX18Q8N8Q8 333 aa22.4■■□□□ 1.18
HMGA2-208ENST00000537429 BTBD10Q9BSF8 475 aa22.4■■□□□ 1.18
HMGA2-208ENST00000537429 THUMPD1Q9NXG2 353 aaKnown RBP22.4■■□□□ 1.18
HMGA2-208ENST00000537429 AP3M1Q9Y2T2 418 aa22.4■■□□□ 1.18
HMGA2-208ENST00000537429 PCDHGB3Q9Y5G1 929 aa22.4■■□□□ 1.18
HMGA2-208ENST00000537429 GXYLT2A0PJZ3 443 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 A8MVJ9 347 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 ITGA10O75578 1167 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 OR2J2O76002 312 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 NUDT7P0C024 238 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 PIGAP37287 484 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 PSPHP78330 225 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 HEPHL1Q6MZM0 1159 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 ZNF354BQ96LW1 612 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 ZNF583Q96ND8 569 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 CNTNAP3BQ96NU0 1288 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 RASL10BQ96S79 203 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 BTBD2Q9BX70 525 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 CNTNAP3Q9BZ76 1288 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 EXD2Q9NVH0 621 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 CBLCQ9ULV8 474 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 YARS2Q9Y2Z4 477 aaKnown RBP22.39■■□□□ 1.17
HMGA2-208ENST00000537429 OR10H1Q9Y4A9 318 aa22.39■■□□□ 1.17
HMGA2-208ENST00000537429 TPRP12270 2363 aaKnown RBP22.39■■□□□ 1.17
HMGA2-208ENST00000537429 ACACBO00763 2458 aa22.38■■□□□ 1.17
HMGA2-208ENST00000537429 PRAMEF27A3QJZ7 478 aa22.38■■□□□ 1.17
HMGA2-208ENST00000537429 GYG2O15488 501 aa22.38■■□□□ 1.17
HMGA2-208ENST00000537429 CEACAM4O75871 244 aa22.38■■□□□ 1.17
HMGA2-208ENST00000537429 SOX11P35716 441 aa22.38■■□□□ 1.17
HMGA2-208ENST00000537429 MRPS22P82650 360 aaKnown RBP22.38■■□□□ 1.17
HMGA2-208ENST00000537429 ADRM1Q16186 407 aa22.38■■□□□ 1.17
HMGA2-208ENST00000537429 MEP1AQ16819 746 aa22.38■■□□□ 1.17
HMGA2-208ENST00000537429 LACTB2Q53H82 288 aaPredicted RBP22.38■■□□□ 1.17
HMGA2-208ENST00000537429 CRB2Q5IJ48 1285 aa22.38■■□□□ 1.17
HMGA2-208ENST00000537429 ACER2Q5QJU3 275 aa22.38■■□□□ 1.17
HMGA2-208ENST00000537429 BORAQ6PGQ7 559 aa22.38■■□□□ 1.17
HMGA2-208ENST00000537429 NET1Q7Z628 596 aaPredicted RBP22.38■■□□□ 1.17
HMGA2-208ENST00000537429 TAGAPQ8N103 731 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms