RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 PGRP06401 933 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 IFI6P09912 130 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 POU3F2P20265 443 aaPredicted RBP12.05□□□□□ -0.48
CHFR-210ENST00000535527 NME2P22392 152 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 ABCD3P28288 659 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 LSP1P33241 339 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 RFC3P40938 356 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 PTGDSP41222 190 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 KIR3DL1P43629 444 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 MAN2A2P49641 1150 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 MANFP55145 182 aaKnown RBP12.05□□□□□ -0.48
CHFR-210ENST00000535527 CASP9P55211 416 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 GPR85P60893 370 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 AP2B1P63010 937 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 OC90Q02509 493 aaPredicted RBP12.05□□□□□ -0.48
CHFR-210ENST00000535527 INPP5JQ15735 1006 aaPredicted RBP12.05□□□□□ -0.48
CHFR-210ENST00000535527 DUSP5Q16690 384 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 GSTA3Q16772 222 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 ACAD11Q709F0 780 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 GALNTL5Q7Z4T8 443 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 GALNT10Q86SR1 603 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 MSRB3Q8IXL7 192 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 SAMD14Q8IZD0 417 aaPredicted RBP12.05□□□□□ -0.48
CHFR-210ENST00000535527 CYP4Z2PQ8N1L4 340 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 C10orf111Q8N326 155 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 SLC16A11Q8NCK7 471 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 NUP43Q8NFH3 380 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 OR5P2Q8WZ92 322 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 PIK3R3Q92569 461 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 SPACA9Q96E40 222 aaPredicted RBP12.05□□□□□ -0.48
CHFR-210ENST00000535527 NODALQ96S42 347 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 UTP23Q9BRU9 249 aaKnown RBP12.05□□□□□ -0.48
CHFR-210ENST00000535527 LMF2Q9BU23 707 aaKnown RBP12.05□□□□□ -0.48
CHFR-210ENST00000535527 RTN4RQ9BZR6 473 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 DDX18Q9NVP1 670 aaKnown RBP12.05□□□□□ -0.48
CHFR-210ENST00000535527 CNOT11Q9UKZ1 510 aaKnown RBP12.05□□□□□ -0.48
CHFR-210ENST00000535527 C2CD3Q4AC94 2353 aa12.05□□□□□ -0.48
CHFR-210ENST00000535527 PRAMEF27A3QJZ7 478 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 FRG2CA6NGY1 282 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 TO15178 435 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 ZNHIT1O43257 154 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 TSPAN2O60636 221 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 UGT2B11O75310 529 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 SLC25A12O75746 678 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 SLC22A3O75751 556 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 GSNP06396 782 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 MST1P26927 711 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 GPC1P35052 558 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 RPL3P39023 403 aaKnown RBP12.04□□□□□ -0.48
CHFR-210ENST00000535527 PPICP45877 212 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 MVDP53602 400 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 FUT5Q11128 374 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 RCAN2Q14206 197 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 NTRK2Q16620 822 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 ZNF766Q5HY98 468 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 PAGE3Q5JUK9 113 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 PRAMEF20Q5VT98 475 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 SLC2A7Q6PXP3 512 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 RETREG3Q86VR2 466 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 CPSF7Q8N684 471 aaKnown RBP12.04□□□□□ -0.48
CHFR-210ENST00000535527 PSD4Q8NDX1 1056 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 C17orf47Q8NEP4 570 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 OR5M3Q8NGP4 307 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 ZFP28Q8NHY6 868 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 RNF138Q8WVD3 245 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 ASB15Q8WXK1 588 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 TMBIM1Q969X1 311 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 TP53INP1Q96A56 240 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 SNRNP40Q96DI7 357 aaKnown RBP12.04□□□□□ -0.48
CHFR-210ENST00000535527 ERP27Q96DN0 273 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 OMA1Q96E52 524 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 LCORQ96JN0 433 aaPredicted RBP12.04□□□□□ -0.48
CHFR-210ENST00000535527 FRMD6Q96NE9 622 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 CCDC115Q96NT0 180 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 MS4A4EQ96PG1 132 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 KLHDC3Q9BQ90 382 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.04□□□□□ -0.48
CHFR-210ENST00000535527 ZCCHC3Q9NUD5 404 aaKnown RBP12.04□□□□□ -0.48
CHFR-210ENST00000535527 SLAMF8Q9P0V8 285 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 TEKT2Q9UIF3 430 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 NPFFR2Q9Y5X5 522 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 HEATR5AQ86XA9 2040 aa12.04□□□□□ -0.48
CHFR-210ENST00000535527 DNAJC13O75165 2243 aa12.03□□□□□ -0.48
CHFR-210ENST00000535527 KIAA1549Q9HCM3 1950 aa12.03□□□□□ -0.48
CHFR-210ENST00000535527 DYTNA2CJ06 578 aa12.03□□□□□ -0.48
CHFR-210ENST00000535527 LRRC3CA6NJW4 275 aa12.03□□□□□ -0.48
CHFR-210ENST00000535527 A8MVJ9 347 aa12.03□□□□□ -0.48
CHFR-210ENST00000535527 NR5A2O00482 541 aa12.03□□□□□ -0.48
CHFR-210ENST00000535527 FCHO1O14526 889 aa12.03□□□□□ -0.48
CHFR-210ENST00000535527 EMC8O43402 210 aa12.03□□□□□ -0.48
CHFR-210ENST00000535527 DYRK3O43781 588 aa12.03□□□□□ -0.48
CHFR-210ENST00000535527 NKX2-2O95096 273 aa12.03□□□□□ -0.48
CHFR-210ENST00000535527 CPSF4O95639 269 aaKnown RBP12.03□□□□□ -0.48
CHFR-210ENST00000535527 HMGN2P05204 90 aaKnown RBP12.03□□□□□ -0.48
CHFR-210ENST00000535527 SP1P08047 785 aa12.03□□□□□ -0.48
CHFR-210ENST00000535527 RNF224P0DH78 156 aa12.03□□□□□ -0.48
CHFR-210ENST00000535527 DRD5P21918 477 aa12.03□□□□□ -0.48
CHFR-210ENST00000535527 S100A3P33764 101 aa12.03□□□□□ -0.48
CHFR-210ENST00000535527 SOAT1P35610 550 aa12.03□□□□□ -0.48
CHFR-210ENST00000535527 PIGAP37287 484 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms