RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 C15orf41Q9Y2V0 281 aa9.18□□□□□ -0.94
CLSTN3-203ENST00000534830 A0A1W2PPM1 405 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 FRG2CA6NGY1 282 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 HSPB2A8KAH6 182 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 FAM47E-STBD1D6RA91 191 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 H7C1Q1 480 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 GOLGA8RI6L899 631 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 SYT5O00445 386 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 SNPHO15079 494 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 PCDH7O60245 1069 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 ICOSLGO75144 302 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 UGT2B11O75310 529 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 BCAS2O75934 225 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 ENO1P06733 434 aaKnown RBP9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 IL3P08700 152 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 CT45A8P0DMV1 189 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 CT45A9P0DMV2 189 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 BMP7P18075 431 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 UQCRC1P31930 480 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 GSTM5P46439 218 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 FOXA1P55317 472 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 MRPS35P82673 323 aaKnown RBP9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 HMGCS1Q01581 520 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 LCP2Q13094 533 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 HSPB2Q16082 182 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 PRSS53Q2L4Q9 553 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 ACSF3Q4G176 576 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 EIPR1Q53HC9 387 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 SPIN4Q56A73 249 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 CT45A2Q5DJT8 189 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 C6orf163Q5TEZ5 329 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 SHEQ5VZ18 495 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 SLC30A6Q6NXT4 461 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 CIARTQ8N365 385 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 EIF1ADQ8N9N8 165 aaKnown RBP9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 WDSUB1Q8N9V3 476 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 RELL2Q8NC24 303 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 NAXEQ8NCW5 288 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 FAM83FQ8NEG4 500 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 OR1J4Q8NGS1 313 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 C16orf78Q8WTQ4 265 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 WDYHV1Q96HA8 205 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 COX4I2Q96KJ9 171 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 BTBD9Q96Q07 612 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 KCNA7Q96RP8 456 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 UGT2B28Q9BY64 529 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 ALKBH4Q9NXW9 302 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 EHD3Q9NZN3 535 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 BCAP29Q9UHQ4 241 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 CBLCQ9ULV8 474 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 EXO1Q9UQ84 846 aaKnown RBP9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 STK38LQ9Y2H1 464 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 TIMM22Q9Y584 194 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 ZNF780BQ9Y6R6 833 aa9.17□□□□□ -0.94
CLSTN3-203ENST00000534830 C15orf38-AP3S2A0A0A6YYH1 394 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 OR6C70A6NIJ9 312 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 CD8B2A6NJW9 211 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 B4DXG7 233 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 GNB5O14775 395 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 ARHGEF9O43307 516 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 PLOD3O60568 738 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 TSPAN2O60636 221 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 TRAPPC6AO75865 159 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 PROCP04070 461 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 SHBGP04278 402 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 KRT15P19012 456 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 HMOX2P30519 316 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 TIA1P31483 386 aaKnown RBP eCLIP9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 ALDH9A1P49189 494 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 NAGLUP54802 743 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 GAS1P54826 345 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 DNAJB13P59910 316 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 NAA20P61599 178 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 HEPACAMQ14CZ8 416 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 NNATQ16517 81 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 FBXL19-AS1Q494R0 122 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 FLYWCH1Q4VC44 716 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 DCST1Q5T197 706 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 NSUN5P2Q63ZY6 315 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 NPSR1Q6W5P4 371 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 ZYG11AQ6WRX3 759 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 TRIM46Q7Z4K8 759 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 ADGRE4PQ86SQ3 457 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 TDRPQ86YL5 185 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 LACC1Q8IV20 430 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 PM20D2Q8IYS1 436 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 SAMD14Q8IZD0 417 aaPredicted RBP9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 LIX1Q8N485 282 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 TNIP2Q8NFZ5 429 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 FAM222BQ8WU58 562 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 SLC35A4Q96G79 324 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 VSTM2LQ96N03 204 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 SH3GL2Q99962 352 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 RHOXF2Q9BQY4 288 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 OSBPL11Q9BXB4 747 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 SHCBP1LQ9BZQ2 653 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 ANKRA2Q9H9E1 313 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 CALHM2Q9HA72 323 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 GALNT9Q9HCQ5 603 aa9.16□□□□□ -0.94
CLSTN3-203ENST00000534830 TNFRSF12AQ9NP84 129 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms