RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	OR6C70	A6NIJ9	312 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	LRRC3C	A6NJW4	275 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	KLF11	O14901	512 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	ZNHIT1	O43257	154 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	UGT2B11	O75310	529 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	TRIM3	O75382	744 aa	Predicted RBP	13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	IGHG3	P01860	377 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	RFPL3S	P0C7P2	107 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	LAMP1	P11279	417 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	LBP	P18428	481 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	EFNA1	P20827	205 aa	Predicted RBP	13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	PTGS2	P35354	604 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	KRT20	P35900	424 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	CDK9	P50750	372 aa	Known RBP	13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	C21orf58	P58505	322 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	OCRL	Q01968	901 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	SLC10A1	Q14973	349 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	MLC1	Q15049	377 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	ZNHIT3	Q15649	155 aa	Predicted RBP	13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	CPTP	Q5TA50	214 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	DESI1	Q6ICB0	168 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	ARHGAP11A	Q6P4F7	1023 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	PACS2	Q86VP3	889 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	CEP70	Q8NHQ1	597 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	ZNF75CP	Q92670	426 aa	Predicted RBP	13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	NTNG2	Q96CW9	530 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	TMCO6	Q96DC7	493 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	SLC35A4	Q96G79	324 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	ZNF597	Q96LX8	424 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	JSRP1	Q96MG2	331 aa	Predicted RBP	13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	COL21A1	Q96P44	957 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	NODAL	Q96S42	347 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	METTL7A	Q9H8H3	244 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	C3orf14	Q9HBI5	128 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	NTM	Q9P121	344 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	SH3BGRL2	Q9UJC5	107 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	TINAG	Q9UJW2	476 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	MAPRE3	Q9UPY8	281 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	OR10H1	Q9Y4A9	318 aa		13.31	□□□□□ -0.28
CTSB-231	ENST00000534382	NIN	Q8N4C6	2090 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	DIDO1	Q9BTC0	2240 aa	Known RBP	13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	TTC36	A6NLP5	189 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	SLCO1B7	G3V0H7	640 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	CCL21	O00585	134 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	PRRG2	O14669	202 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	HDAC3	O15379	428 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	TSPAN2	O60636	221 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	KIT	P10721	976 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	PNLIPRP2	P54317	469 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	PRKAG1	P54619	331 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	DIO3	P55073	304 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	SNTA1	Q13424	505 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	GAB1	Q13480	694 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	EFR3A	Q14156	821 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	CYP27C1	Q4G0S4	372 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	SLC30A6	Q6NXT4	461 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	LARP4	Q71RC2	724 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	CAMKMT	Q7Z624	323 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	WDR75	Q8IWA0	830 aa	Known RBP	13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	NUP43	Q8NFH3	380 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	OR4N2	Q8NGD1	307 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	NUDT8	Q8WV74	236 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	OR5P2	Q8WZ92	322 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	TMEM41A	Q96HV5	264 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	ADO	Q96SZ5	270 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	LMF2	Q9BU23	707 aa	Known RBP	13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	BHLHE41	Q9C0J9	482 aa	Predicted RBP	13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	ZNF703	Q9H7S9	590 aa	Predicted RBP	13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	QPCTL	Q9NXS2	382 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	B4GALT7	Q9UBV7	327 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	MARCO	Q9UEW3	520 aa	Predicted RBP	13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	FLNB	O75369	2602 aa	Known RBP	13.3	□□□□□ -0.28
CTSB-231	ENST00000534382	GTF3C1	Q12789	2109 aa		13.3	□□□□□ -0.28
CTSB-231	ENST00000534382		A0A1B0GVC2	190 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	TRPC5OS	A6NMA1	111 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	SDHD	O14521	159 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	EMC8	O43402	210 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	SUSD5	O60279	629 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	ICOSLG	O75144	302 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	CELA3A	P09093	270 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	IL12B	P29460	328 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	GABRA3	P34903	492 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	PTGDS	P41222	190 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	MASP1	P48740	699 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	MRPS22	P82650	360 aa	Known RBP	13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	LSM12	Q3MHD2	195 aa	Known RBP	13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	FNDC7	Q5VTL7	733 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	OGFOD2	Q6N063	350 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	MTFR2	Q6P444	385 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	MYO7B	Q6PIF6	2116 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	TRIL	Q7L0X0	811 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	WDR53	Q7Z5U6	358 aa	Predicted RBP	13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	DOLPP1	Q86YN1	238 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	FAM57A	Q8TBR7	257 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	DUSP26	Q9BV47	211 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	OSBPL11	Q9BXB4	747 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	DPY30	Q9C005	99 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382		Q9N2J8	555 aa		13.29	□□□□□ -0.28
CTSB-231	ENST00000534382	ACKR4	Q9NPB9	350 aa		13.29	□□□□□ -0.28

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