RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 SH3GLB1Q9Y371 365 aa9.08□□□□□ -0.96
CHKA-207ENST00000533728 ANKHD1Q8IWZ3 2542 aaKnown RBP9.08□□□□□ -0.96
CHKA-207ENST00000533728 CABIN1Q9Y6J0 2220 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 KNL1Q8NG31 2342 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 CCDC163A0A0D9SF12 145 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 KIR2DS5A0A0G2JLQ3 304 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 A0A0G2JNG1 304 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 SH3PXD2BA1X283 911 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 PRAMEF26H0Y7S4 382 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 KIR2DS3K7RE56 304 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 FFAR1O14842 300 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 PCDH17O14917 1159 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 ZSCAN9O15535 394 aaPredicted RBP9.07□□□□□ -0.96
CHKA-207ENST00000533728 BCAS1O75363 584 aaPredicted RBP9.07□□□□□ -0.96
CHKA-207ENST00000533728 INMTO95050 263 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 TNFP01375 233 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 SERPIND1P05546 499 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 OR12D1P0DN82 309 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 NDUFV2P19404 249 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 UGT2B10P36537 528 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 SLC19A1P41440 591 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 SERPINB10P48595 397 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 MASP1P48740 699 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 MAPK10P53779 464 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 UGT2B15P54855 530 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 LIM2P55344 173 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 TNFRSF17Q02223 184 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.07□□□□□ -0.96
CHKA-207ENST00000533728 IRF3Q14653 427 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 KIR2DS5Q14953 304 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 SLC25A30Q5SVS4 291 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 MEDAGQ5VYS4 303 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 SLX4IPQ5VYV7 408 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 HEPHL1Q6MZM0 1159 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 ZCCHC12Q6PEW1 402 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 KLHL17Q6TDP4 642 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 LRRC69Q6ZNQ3 347 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 SYT13Q7L8C5 426 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 P2RY8Q86VZ1 359 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 PLD3Q8IV08 490 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 ZNF655Q8N720 491 aaPredicted RBP9.07□□□□□ -0.96
CHKA-207ENST00000533728 SMYD1Q8NB12 490 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 AVL9Q8NBF6 648 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 AQP11Q8NBQ7 271 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 FAM46DQ8NEK8 389 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 OR8K5Q8NH50 307 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 UTP15Q8TED0 518 aaKnown RBP9.07□□□□□ -0.96
CHKA-207ENST00000533728 S100ZQ8WXG8 99 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 SGCDQ92629 289 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 PPP1R14BQ96C90 147 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 CNRIP1Q96F85 164 aaPredicted RBP9.07□□□□□ -0.96
CHKA-207ENST00000533728 ZC3H10Q96K80 434 aaKnown RBP9.07□□□□□ -0.96
CHKA-207ENST00000533728 C10orf90Q96M02 699 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 PRRC1Q96M27 445 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 CSF3RQ99062 836 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 NRTNQ99748 197 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 NIPSNAP1Q9BPW8 284 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 COPS4Q9BT78 406 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 DCUN1D5Q9BTE7 237 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 ACTRT3Q9BYD9 372 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 GSDMCQ9BYG8 508 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 UCK2Q9BZX2 261 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 POLR2J2Q9GZM3 115 aaKnown RBP9.07□□□□□ -0.96
CHKA-207ENST00000533728 CCDC90BQ9GZT6 254 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 NAA50Q9GZZ1 169 aaKnown RBP9.07□□□□□ -0.96
CHKA-207ENST00000533728 POLR2J3Q9H1A7 115 aaKnown RBP9.07□□□□□ -0.96
CHKA-207ENST00000533728 FZD3Q9NPG1 666 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 IMPAD1Q9NX62 359 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 GIN1Q9NXP7 522 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 ZNF226Q9NYT6 803 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 PILRAQ9UKJ1 303 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 ATG4BQ9Y4P1 393 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 ZNF780BQ9Y6R6 833 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 A3GALT2U3KPV4 340 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 HIVEP1P15822 2718 aa9.07□□□□□ -0.96
CHKA-207ENST00000533728 NIPBLQ6KC79 2804 aaeCLIP9.07□□□□□ -0.96
CHKA-207ENST00000533728 TDRD6O60522 2096 aaKnown RBP9.06□□□□□ -0.96
CHKA-207ENST00000533728 PRAMEF27A3QJZ7 478 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 C4orf51C9J302 202 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 J3KTA2 159 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 BTN3A3O00478 584 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 B3GALT2O43825 422 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 RASGRP1O95267 797 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 SEMA4FO95754 770 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 GUSBP08236 651 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 GABRG2P18507 467 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 TNFRSF1BP20333 461 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 GSTM3P21266 225 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 CERS1P27544 350 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 TLX1P31314 330 aaPredicted RBP9.06□□□□□ -0.96
CHKA-207ENST00000533728 IFNA8P32881 189 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 ACSL1P33121 698 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 IFNGR2P38484 337 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 ACTR1BP42025 376 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 MAN2A2P49641 1150 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 CASP9P55211 416 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 ACTR1AP61163 376 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 RPS26P62854 115 aaKnown RBP9.06□□□□□ -0.96
CHKA-207ENST00000533728 TUBA1BP68363 451 aa9.06□□□□□ -0.96
CHKA-207ENST00000533728 ILF3Q12906 894 aaKnown RBP eCLIP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms