RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 FARSAQ9Y285 508 aaKnown RBP16.62■□□□□ 0.25
PHRF1-205ENST00000533464 ISPDA4D126 451 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 EEF1E1O43324 174 aaKnown RBP16.62■□□□□ 0.25
PHRF1-205ENST00000533464 CD97P48960 835 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 FAM78AQ5JUQ0 283 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 ZNF440Q8IYI8 595 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 ISL2Q96A47 359 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 HSPB11Q9Y547 144 aa16.62■□□□□ 0.25
PHRF1-205ENST00000533464 FXYD6-FXYD2A0A087WZ82 144 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 JMJD7P0C870 316 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 ARNTP27540 789 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 PGFP49763 221 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 GBX1Q14549 363 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 KIR2DS3Q14952 304 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 GLT8D1Q68CQ7 371 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 ANKK1Q8NFD2 765 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 FXYD6Q9H0Q3 95 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 MEMO1Q9Y316 297 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 ABLIM3O94929 683 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 GJA4P35212 333 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 ADH7P40394 386 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 CLRN1P58418 232 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 POU4F2Q12837 409 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 APOFQ13790 326 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 CBLL1Q75N03 491 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 ADAMTS18Q8TE60 1221 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 MSLNLQ96KJ4 702 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 ALOXE3Q9BYJ1 711 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 RXFP3Q9NSD7 469 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 OR6C2Q9NZP2 312 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 PPP4R1LQ9P1A2 415 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 ABCG2Q9UNQ0 655 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 MYO10Q9HD67 2058 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 GPR89AB7ZAQ6 455 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 GPR89BP0CG08 455 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 SPARTQ8N0X7 666 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 SLC15A4Q8N697 577 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 GAL3ST3Q96A11 431 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 DPH1Q9BZG8 443 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 SMAD9O15198 467 aaKnown RBP16.61■□□□□ 0.25
PHRF1-205ENST00000533464 PDSS1Q5T2R2 415 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 LRFN4Q6PJG9 635 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 ZNF283Q8N7M2 679 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 OR51L1Q8NGJ5 315 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 WFDC5Q8TCV5 224 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 CNN2Q99439 309 aaKnown RBP16.61■□□□□ 0.25
PHRF1-205ENST00000533464 INTS6Q9UL03 887 aaKnown RBP16.61■□□□□ 0.25
PHRF1-205ENST00000533464 PLEKHA6Q9Y2H5 1048 aa16.61■□□□□ 0.25
PHRF1-205ENST00000533464 CCNOP22674 350 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 OTUD1Q5VV17 481 aaPredicted RBP16.6■□□□□ 0.25
PHRF1-205ENST00000533464 CCBE1Q6UXH8 406 aaPredicted RBP16.6■□□□□ 0.25
PHRF1-205ENST00000533464 INO80EQ8NBZ0 244 aaPredicted RBP16.6■□□□□ 0.25
PHRF1-205ENST00000533464 ASB6Q9NWX5 421 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 SLC7A7Q9UM01 511 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 RDH16O75452 317 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 NUDT7P0C024 238 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 H2BFMP0C1H6 154 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 HIST1H1TP22492 207 aaPredicted RBP16.6■□□□□ 0.25
PHRF1-205ENST00000533464 RBM34P42696 430 aaKnown RBP16.6■□□□□ 0.25
PHRF1-205ENST00000533464 TMPRSS12Q86WS5 348 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 CPOQ8IVL8 374 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 METTL25Q8N6Q8 603 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 NRAPQ86VF7 1730 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 PRAMEF26H0Y7S4 382 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 POLR1CO15160 346 aaPredicted RBP16.6■□□□□ 0.25
PHRF1-205ENST00000533464 PRAMEF2O60811 474 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 KDM4BO94953 1096 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 IMPA1P29218 277 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 MAP2K3P46734 347 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 ACTA2P62736 377 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 ACTG2P63267 376 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 CTBSQ01459 385 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 TBRG1Q3YBR2 411 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 P4HA3Q7Z4N8 544 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 ZNF615Q8N8J6 731 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 OR8S1Q8NH09 359 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 PITHD1Q9GZP4 211 aaPredicted RBP16.6■□□□□ 0.25
PHRF1-205ENST00000533464 SPATA6Q9NWH7 488 aaPredicted RBP16.6■□□□□ 0.25
PHRF1-205ENST00000533464 OR2AT4A6NND4 320 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 PXNP49023 591 aaPredicted RBP16.6■□□□□ 0.25
PHRF1-205ENST00000533464 PRDX1Q06830 199 aaKnown RBP16.6■□□□□ 0.25
PHRF1-205ENST00000533464 ZC3H14Q6PJT7 736 aaKnown RBP16.6■□□□□ 0.25
PHRF1-205ENST00000533464 CYB561A3Q8NBI2 242 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 NOP16Q9Y3C1 178 aaKnown RBP16.6■□□□□ 0.25
PHRF1-205ENST00000533464 NME7Q9Y5B8 376 aa16.6■□□□□ 0.25
PHRF1-205ENST00000533464 A0A0A6YYC8 382 aaPredicted RBP16.59■□□□□ 0.25
PHRF1-205ENST00000533464 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.59■□□□□ 0.25
PHRF1-205ENST00000533464 I3L1I5 382 aaPredicted RBP16.59■□□□□ 0.25
PHRF1-205ENST00000533464 S100A9P06702 114 aaKnown RBP16.59■□□□□ 0.25
PHRF1-205ENST00000533464 HMGA1P17096 107 aaKnown RBP16.59■□□□□ 0.25
PHRF1-205ENST00000533464 GGT2P36268 569 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 HOXC5Q00444 222 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 PRKCDQ05655 676 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 MEX3DQ86XN8 651 aaKnown RBP16.59■□□□□ 0.25
PHRF1-205ENST00000533464 MFSD6LQ8IWD5 586 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 FCAMRQ8WWV6 532 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 PINK1Q9BXM7 581 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 METTL8Q9H825 291 aaKnown RBP16.59■□□□□ 0.25
PHRF1-205ENST00000533464 STARD5Q9NSY2 213 aa16.59■□□□□ 0.25
PHRF1-205ENST00000533464 PCDHA9Q9Y5H5 950 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms