RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.75■□□□□ 0.59
CCS-208ENST00000533244 WIPF3A6NGB9 483 aa18.75■□□□□ 0.59
CCS-208ENST00000533244 FAM166BA8MTA8 275 aa18.75■□□□□ 0.59
CCS-208ENST00000533244 ANKRD28O15084 1053 aa18.75■□□□□ 0.59
CCS-208ENST00000533244 SLC19A2O60779 497 aa18.75■□□□□ 0.59
CCS-208ENST00000533244 GPC1P35052 558 aa18.75■□□□□ 0.59
CCS-208ENST00000533244 HSF1Q00613 529 aa18.75■□□□□ 0.59
CCS-208ENST00000533244 BICRALQ6AI39 1079 aa18.75■□□□□ 0.59
CCS-208ENST00000533244 DESI1Q6ICB0 168 aa18.75■□□□□ 0.59
CCS-208ENST00000533244 SLC44A2Q8IWA5 706 aaPredicted RBP18.75■□□□□ 0.59
CCS-208ENST00000533244 FAM109AQ8N4B1 249 aa18.75■□□□□ 0.59
CCS-208ENST00000533244 PIWIL2Q8TC59 973 aaKnown RBP18.75■□□□□ 0.59
CCS-208ENST00000533244 RNF138Q8WVD3 245 aa18.75■□□□□ 0.59
CCS-208ENST00000533244 GIMAP5Q96F15 307 aa18.75■□□□□ 0.59
CCS-208ENST00000533244 MAELQ96JY0 434 aaKnown RBP18.75■□□□□ 0.59
CCS-208ENST00000533244 NODALQ96S42 347 aa18.75■□□□□ 0.59
CCS-208ENST00000533244 PRPF18Q99633 342 aaKnown RBP18.75■□□□□ 0.59
CCS-208ENST00000533244 DOHHQ9BU89 302 aa18.75■□□□□ 0.59
CCS-208ENST00000533244 BHLHE41Q9C0J9 482 aaPredicted RBP18.75■□□□□ 0.59
CCS-208ENST00000533244 ZNF703Q9H7S9 590 aaPredicted RBP18.75■□□□□ 0.59
CCS-208ENST00000533244 BOKQ9UMX3 212 aaPredicted RBP18.75■□□□□ 0.59
CCS-208ENST00000533244 SPTAN1Q13813 2472 aaKnown RBP18.75■□□□□ 0.59
CCS-208ENST00000533244 FLNBO75369 2602 aaKnown RBP18.75■□□□□ 0.59
CCS-208ENST00000533244 A0A1W2PRB8 838 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 TTC36A6NLP5 189 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 TRPC5OSA6NMA1 111 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 ZNF195O14628 629 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 ABCB7O75027 752 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 SNX4O95219 450 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 LDLRP01130 860 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 IGHG3P01860 377 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 ALDOCP09972 364 aaKnown RBP18.74■□□□□ 0.59
CCS-208ENST00000533244 RNF224P0DH78 156 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 PTGDSP41222 190 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 CA7P43166 264 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 FNDC7Q5VTL7 733 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 MAVSQ7Z434 540 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 SPPL2CQ8IUH8 684 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 OR4N2Q8NGD1 307 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 SSC4DQ8WTU2 575 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 OR5P2Q8WZ92 322 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 MAGED4Q96JG8 741 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 C7orf26Q96N11 449 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 RILPQ96NA2 401 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 COL21A1Q96P44 957 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 NINQ8N4C6 2090 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 A0A1B0GUH1 482 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 KITP10721 976 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 EFNA1P20827 205 aaPredicted RBP18.74■□□□□ 0.59
CCS-208ENST00000533244 EPHA3P29320 983 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 MAGEA5P43359 124 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 PNLIPRP2P54317 469 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 PPP2R2AP63151 447 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 SNTA1Q13424 505 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 CYP27C1Q4G0S4 372 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 EXOSC6Q5RKV6 272 aaKnown RBP18.74■□□□□ 0.59
CCS-208ENST00000533244 C1QL3Q5VWW1 255 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 CEP70Q8NHQ1 597 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 TMEM41AQ96HV5 264 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 ZNF597Q96LX8 424 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 DUSP26Q9BV47 211 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 WDR55Q9H6Y2 383 aaPredicted RBP18.74■□□□□ 0.59
CCS-208ENST00000533244 C3orf14Q9HBI5 128 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 AIG1Q9NVV5 245 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 ZNF446Q9NWS9 450 aa18.74■□□□□ 0.59
CCS-208ENST00000533244 ZNF407Q9C0G0 2248 aa18.73■□□□□ 0.59
CCS-208ENST00000533244 HECTD1Q9ULT8 2610 aa18.73■□□□□ 0.59
CCS-208ENST00000533244 GTF3C1Q12789 2109 aa18.73■□□□□ 0.59
CCS-208ENST00000533244 LRRTM2O43300 516 aa18.73■□□□□ 0.59
CCS-208ENST00000533244 EMC8O43402 210 aa18.73■□□□□ 0.59
CCS-208ENST00000533244 REM1O75628 298 aa18.73■□□□□ 0.59
CCS-208ENST00000533244 RFPL3SP0C7P2 107 aa18.73■□□□□ 0.59
CCS-208ENST00000533244 SPATA19Q7Z5L4 167 aa18.73■□□□□ 0.59
CCS-208ENST00000533244 NUP43Q8NFH3 380 aa18.73■□□□□ 0.59
CCS-208ENST00000533244 OR8J2Q8NGG1 315 aa18.73■□□□□ 0.59
CCS-208ENST00000533244 TESCQ96BS2 214 aa18.73■□□□□ 0.59
CCS-208ENST00000533244 FAM120BQ96EK7 910 aaKnown RBP18.73■□□□□ 0.59
CCS-208ENST00000533244 MS4A4EQ96PG1 132 aa18.73■□□□□ 0.59
CCS-208ENST00000533244 ADOQ96SZ5 270 aa18.73■□□□□ 0.59
CCS-208ENST00000533244 DEFB127Q9H1M4 99 aa18.73■□□□□ 0.59
CCS-208ENST00000533244 QPCTLQ9NXS2 382 aa18.73■□□□□ 0.59
CCS-208ENST00000533244 NCKAP5O14513 1909 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 A0A1B0GTH9 108 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 A0A1B0GVC2 190 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 NKX2-2O95096 273 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 CELA3AP09093 270 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 WNT3P56703 355 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 GAB1Q13480 694 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 EFR3AQ14156 821 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 ZNHIT3Q15649 155 aaPredicted RBP18.72■□□□□ 0.59
CCS-208ENST00000533244 C3AR1Q16581 482 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 TMEM198Q66K66 360 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 MFSD12Q6NUT3 480 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 SLC30A6Q6NXT4 461 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 ARHGAP11AQ6P4F7 1023 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 WDR53Q7Z5U6 358 aaPredicted RBP18.72■□□□□ 0.59
CCS-208ENST00000533244 CDRT4Q8N9R6 151 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 LRRC8CQ8TDW0 803 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 OSBPL11Q9BXB4 747 aa18.72■□□□□ 0.59
CCS-208ENST00000533244 DPY30Q9C005 99 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms