RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 PRR5P85299 388 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 GAB1Q13480 694 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 ZNHIT3Q15649 155 aaPredicted RBP11.02□□□□□ -0.65
SSBP3-214ENST00000533209 CYP27C1Q4G0S4 372 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 RNFT1Q5M7Z0 435 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 SLC22A10Q63ZE4 541 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 MFSD12Q6NUT3 480 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 FAM180AQ6UWF9 173 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 SZRD1Q7Z422 152 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 ANKRD46Q86W74 232 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 MIER2Q8N344 545 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 FBXW8Q8N3Y1 598 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 CPSF7Q8N684 471 aaKnown RBP11.02□□□□□ -0.65
SSBP3-214ENST00000533209 BCORP1Q8N888 145 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 CDRT4Q8N9R6 151 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 ZFP62Q8NB50 900 aaPredicted RBP11.02□□□□□ -0.65
SSBP3-214ENST00000533209 VPS37AQ8NEZ2 397 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 OR56A1Q8NGH5 318 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 OR4A15Q8NGL6 344 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 GOT1L1Q8NHS2 421 aaPredicted RBP11.02□□□□□ -0.65
SSBP3-214ENST00000533209 SPPL2AQ8TCT8 520 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 FAR1Q8WVX9 515 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 HGDQ93099 445 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 C16orf58Q96GQ5 468 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 CCDC115Q96NT0 180 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 OR52E6Q96RD3 313 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 SECISBP2Q96T21 854 aaKnown RBP11.02□□□□□ -0.65
SSBP3-214ENST00000533209 SACM1LQ9NTJ5 587 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 GPATCH2Q9NW75 528 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 CNIH4Q9P003 139 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 BTNL2Q9UIR0 455 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 OR10H1Q9Y4A9 318 aa11.02□□□□□ -0.65
SSBP3-214ENST00000533209 GXYLT2A0PJZ3 443 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 FAM234BA2RU67 622 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 PYCARD-AS1I3L0S3 204 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 UGT2B11O75310 529 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 REM1O75628 298 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 WISP2O76076 250 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 CRYABP02511 175 aaKnown RBP11.01□□□□□ -0.65
SSBP3-214ENST00000533209 HMGN2P05204 90 aaKnown RBP11.01□□□□□ -0.65
SSBP3-214ENST00000533209 IL6P05231 212 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 TROVE2P10155 538 aaKnown RBP eCLIP11.01□□□□□ -0.65
SSBP3-214ENST00000533209 MST1P26927 711 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 GABRA3P34903 492 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 DNASE1L1P49184 302 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 ATP4BP51164 291 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 TDGF1P3P51864 188 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 POLR2JP52435 117 aaKnown RBP11.01□□□□□ -0.65
SSBP3-214ENST00000533209 STX1BP61266 288 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 IRX1P78414 480 aaPredicted RBP11.01□□□□□ -0.65
SSBP3-214ENST00000533209 FOXO1Q12778 655 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 TP53BP2Q13625 1128 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 SPDYE7PQ495Y7 208 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 PRAMEF20Q5VT98 475 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 BICRALQ6AI39 1079 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 NUP54Q7Z3B4 507 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 FUNDC1Q8IVP5 155 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 POGLUT1Q8NBL1 392 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 FAM98AQ8NCA5 519 aaKnown RBP11.01□□□□□ -0.65
SSBP3-214ENST00000533209 SLC16A11Q8NCK7 471 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 OR2M7Q8NG81 312 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 OR5AK3PQ8NH89 298 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 FBXO30Q8TB52 745 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 NR4A3Q92570 626 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 SLC9A6Q92581 669 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 MOAP1Q96BY2 351 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 NTNG2Q96CW9 530 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 SLC35A4Q96G79 324 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 RILPQ96NA2 401 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 COL21A1Q96P44 957 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 NODALQ96S42 347 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 SLX1AQ9BQ83 275 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 FAM173AQ9BQD7 235 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 YIPF4Q9BSR8 244 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 TMEM120AQ9BXJ8 343 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 ZNF385DQ9H6B1 395 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 Q9N2J8 555 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 SERHLQ9NQF3 203 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 AGPAT4Q9NRZ5 378 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 OLAHQ9NV23 265 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 CBLCQ9ULV8 474 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 PCDHGB4Q9UN71 923 aa11.01□□□□□ -0.65
SSBP3-214ENST00000533209 HELZ2Q9BYK8 2649 aaKnown RBP11□□□□□ -0.65
SSBP3-214ENST00000533209 ANKRD33BA6NCL7 494 aa11□□□□□ -0.65
SSBP3-214ENST00000533209 OR6C70A6NIJ9 312 aa11□□□□□ -0.65
SSBP3-214ENST00000533209 NCF2P19878 526 aaPredicted RBP11□□□□□ -0.65
SSBP3-214ENST00000533209 SOAT1P35610 550 aa11□□□□□ -0.65
SSBP3-214ENST00000533209 RFC3P40938 356 aa11□□□□□ -0.65
SSBP3-214ENST00000533209 CASP3P42574 277 aa11□□□□□ -0.65
SSBP3-214ENST00000533209 CDKN2CP42773 168 aa11□□□□□ -0.65
SSBP3-214ENST00000533209 MAN2A2P49641 1150 aa11□□□□□ -0.65
SSBP3-214ENST00000533209 PRIM2P49643 509 aa11□□□□□ -0.65
SSBP3-214ENST00000533209 GYS2P54840 703 aa11□□□□□ -0.65
SSBP3-214ENST00000533209 SF3A3Q12874 501 aaKnown RBP eCLIP11□□□□□ -0.656e-12■■■■■ 79.1
SSBP3-214ENST00000533209 SQLEQ14534 574 aa11□□□□□ -0.65
SSBP3-214ENST00000533209 LASP1Q14847 261 aaKnown RBP11□□□□□ -0.65
SSBP3-214ENST00000533209 DUSP5Q16690 384 aa11□□□□□ -0.65
SSBP3-214ENST00000533209 VPS26BQ4G0F5 336 aa11□□□□□ -0.65
SSBP3-214ENST00000533209 CDC73Q6P1J9 531 aa11□□□□□ -0.65
SSBP3-214ENST00000533209 TMEM81Q6P7N7 255 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms