RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 KRT20P35900 424 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 SUCLG1P53597 346 aaKnown RBP11.76□□□□□ -0.53
COPB1-209ENST00000533096 GPX6P59796 221 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 MRPS35P82673 323 aaKnown RBP11.76□□□□□ -0.53
COPB1-209ENST00000533096 IRF9Q00978 393 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 DUSP2Q05923 314 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 LTB4RQ15722 352 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 SGCBQ16585 318 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 RAET1LQ5VY80 246 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 WFDC8Q8IUA0 241 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 CCDC116Q8IYX3 515 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 WDR20Q8TBZ3 569 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 UBTD2Q8WUN7 234 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 KLHL29Q96CT2 875 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 CXorf56Q9H5V9 222 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 PRODH2Q9UF12 536 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 PSME2Q9UL46 239 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 LAMP3Q9UQV4 416 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 ZNF337Q9Y3M9 751 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 TSC22D4Q9Y3Q8 395 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 PCDHA9Q9Y5H5 950 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 ZNF780BQ9Y6R6 833 aa11.76□□□□□ -0.53
COPB1-209ENST00000533096 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.75□□□□□ -0.53
COPB1-209ENST00000533096 FAM159BA6NKW6 160 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 EMC8O43402 210 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 HCRTR2O43614 444 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 SCO2O43819 266 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 GMFGO60234 142 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 GUCY1B2O75343 617 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 ESRRBO95718 433 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 CBX7O95931 251 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 TP53P04637 393 aaPredicted RBP11.75□□□□□ -0.53
COPB1-209ENST00000533096 PEPDP12955 493 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 GRK2P25098 689 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 LOXP28300 417 aaPredicted RBP11.75□□□□□ -0.53
COPB1-209ENST00000533096 IL12BP29460 328 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 ALDH18A1P54886 795 aaKnown RBP11.75□□□□□ -0.53
COPB1-209ENST00000533096 EEFSECP57772 596 aaKnown RBP11.75□□□□□ -0.53
COPB1-209ENST00000533096 STX5Q13190 355 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 VEZF1Q14119 521 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 BCL2A1Q16548 175 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 CLEC12BQ2HXU8 276 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 SLC48A1Q6P1K1 146 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 TMEM81Q6P7N7 255 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 ZNF704Q6ZNC4 412 aaPredicted RBP11.75□□□□□ -0.53
COPB1-209ENST00000533096 LARP4Q71RC2 724 aaKnown RBP eCLIP11.75□□□□□ -0.53
COPB1-209ENST00000533096 PAGE2Q7Z2X7 111 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 FNDC9Q8TBE3 224 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 KAT2AQ92830 837 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 EFHD2Q96C19 240 aaPredicted RBP11.75□□□□□ -0.53
COPB1-209ENST00000533096 PRRG4Q9BZD6 226 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 PSD3Q9NYI0 1048 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 MED11Q9P086 117 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 CES1P1Q9UKY3 287 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 CLEC4AQ9UMR7 237 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 SLC12A4Q9UP95 1085 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 GPR55Q9Y2T6 319 aaPredicted RBP11.75□□□□□ -0.53
COPB1-209ENST00000533096 NINQ8N4C6 2090 aa11.75□□□□□ -0.53
COPB1-209ENST00000533096 C1orf226A1L170 272 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 OR6C70A6NIJ9 312 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 H3BML4 177 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 KLF4O43474 513 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 ABCB7O75027 752 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 CGAP01215 116 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 IFNA2P01563 188 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 THBDP07204 575 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 TCP1P17987 556 aaKnown RBP11.74□□□□□ -0.53
COPB1-209ENST00000533096 CCKARP32238 428 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 EMDP50402 254 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 CCNG1P51959 295 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 CLDN15P56746 228 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 CLDN20P56880 219 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 CORO7P57737 925 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 B3GALT5-AS1P59052 145 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 DMTNQ08495 405 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 IFT88Q13099 833 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 PON3Q15166 354 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 FAM83EQ2M2I3 478 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 SH2D4BQ5SQS7 431 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 MROH9Q5TGP6 573 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 FRG2Q64ET8 278 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 SH2D5Q6ZV89 423 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 CCDC25Q86WR0 208 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 PHC2Q8IXK0 858 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 L3MBTL4Q8NA19 623 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 OR4N2Q8NGD1 307 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 OR52B6Q8NGF0 335 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 TM4SF18Q96CE8 201 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 PHF21BQ96EK2 531 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 PLPPR2Q96GM1 343 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 MARK4Q96L34 752 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 FRG2BQ96QU4 278 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 REG4Q9BYZ8 158 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 FARSBQ9NSD9 589 aaKnown RBP11.74□□□□□ -0.53
COPB1-209ENST00000533096 PPP4R1LQ9P1A2 415 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 ZNF639Q9UID6 485 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 OR10H1Q9Y4A9 318 aa11.74□□□□□ -0.53
COPB1-209ENST00000533096 FRG2CA6NGY1 282 aa11.73□□□□□ -0.53
COPB1-209ENST00000533096 OR7A17O14581 309 aa11.73□□□□□ -0.53
COPB1-209ENST00000533096 UGDHO60701 494 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms