RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 SMU1Q2TAY7 513 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 UGT3A2Q3SY77 523 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 METTL21CQ5VZV1 264 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 TMEM198Q66K66 360 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 ZNF787Q6DD87 383 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 TMEM211Q6ICI0 200 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 TMEM81Q6P7N7 255 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 PRR22Q8IZ63 422 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 TWIST2Q8WVJ9 160 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 SARAFQ96BY9 339 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 RILPQ96NA2 401 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 BTBD9Q96Q07 612 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 ELAC2Q9BQ52 826 aaKnown RBP15.28■□□□□ 0.04
PKP3-209ENST00000533069 ANGPTL4Q9BY76 406 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 LDAHQ9H6V9 325 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 ZNF395Q9H8N7 513 aaPredicted RBP15.28■□□□□ 0.04
PKP3-209ENST00000533069 CHST11Q9NPF2 352 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 MARCOQ9UEW3 520 aaPredicted RBP15.28■□□□□ 0.04
PKP3-209ENST00000533069 GPR55Q9Y2T6 319 aaPredicted RBP15.28■□□□□ 0.04
PKP3-209ENST00000533069 ARL2BPQ9Y2Y0 163 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 TMED5Q9Y3A6 229 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 LIPGQ9Y5X9 500 aa15.28■□□□□ 0.04
PKP3-209ENST00000533069 TRGV5A0A0B4J1U4 118 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 GOLGA8QA0A0J9YX86 632 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 GOLGA8OA6NCC3 632 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 GOLGA8NF8WBI6 632 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 COQ9O75208 318 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 ABCB1P08183 1280 aaPredicted RBP15.27■□□□□ 0.04
PKP3-209ENST00000533069 CELA3AP09093 270 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 NTSP30990 170 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 CASP3P42574 277 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 AQP5P55064 265 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 ZNF630Q2M218 657 aaPredicted RBP15.27■□□□□ 0.04
PKP3-209ENST00000533069 EPGNQ6UW88 154 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 C3P1Q6ZMU1 363 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 NUP54Q7Z3B4 507 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 PACS2Q86VP3 889 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 SIMC1Q8NDZ2 872 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 ACTRT2Q8TDY3 377 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 KAT2AQ92830 837 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 OMA1Q96E52 524 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 ZNF764Q96H86 408 aaPredicted RBP15.27■□□□□ 0.04
PKP3-209ENST00000533069 MAELQ96JY0 434 aaKnown RBP15.27■□□□□ 0.04
PKP3-209ENST00000533069 FCRL1Q96LA6 429 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 JSRP1Q96MG2 331 aaPredicted RBP15.27■□□□□ 0.04
PKP3-209ENST00000533069 CCDC28BQ9BUN5 200 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 ACKR4Q9NPB9 350 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 TAS2R9Q9NYW1 312 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 TRIM33Q9UPN9 1127 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 FIS1Q9Y3D6 152 aa15.27■□□□□ 0.04
PKP3-209ENST00000533069 A0A087WV62 115 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 A0A0G2JND7 137 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 FIGNL2A6NMB9 653 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 NPIPA2E9PIF3 369 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 NPIPA3F8WFD2 350 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 ABCB7O75027 752 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 LRATO95237 230 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 CLDN14O95500 239 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 IFI6P09912 130 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 RFPL3SP0C7P2 107 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 ELAVL4P26378 380 aaKnown RBP15.26■□□□□ 0.03
PKP3-209ENST00000533069 HTR1EP28566 365 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 MASP1P48740 699 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 NCBP2P52298 156 aaKnown RBP eCLIP15.26■□□□□ 0.032e-6■□□□□ 8.3
PKP3-209ENST00000533069 MAD2L1Q13257 205 aaPredicted RBP15.26■□□□□ 0.03
PKP3-209ENST00000533069 SNTA1Q13424 505 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 EMC4Q5J8M3 183 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 Q6ZSR9 355 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 CCDC197Q8NCU1 140 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 CEP70Q8NHQ1 597 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 AGR3Q8TD06 166 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 HGDQ93099 445 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 TMEM41AQ96HV5 264 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 VSTM2LQ96N03 204 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 TUBB1Q9H4B7 451 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 EXO5Q9H790 373 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 METTL7AQ9H8H3 244 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 COQ3Q9NZJ6 369 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 PTGDR2Q9Y5Y4 395 aa15.26■□□□□ 0.03
PKP3-209ENST00000533069 OR6C70A6NIJ9 312 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 PLOD2O00469 737 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 ZNF195O14628 629 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 LSM1O15116 133 aaKnown RBP15.25■□□□□ 0.03
PKP3-209ENST00000533069 HNRNPRO43390 633 aaKnown RBP15.25■□□□□ 0.03
PKP3-209ENST00000533069 ERN1O75460 977 aaKnown RBP15.25■□□□□ 0.03
PKP3-209ENST00000533069 LINC00032P0C843 101 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 GDF1P27539 372 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 RPL38P63173 70 aaKnown RBP15.25■□□□□ 0.03
PKP3-209ENST00000533069 PDCD2Q16342 344 aaPredicted RBP15.25■□□□□ 0.03
PKP3-209ENST00000533069 GXYLT1Q4G148 440 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 XKR7Q5GH72 579 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 WLSQ5T9L3 541 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 BICRALQ6AI39 1079 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 SP5Q6BEB4 398 aaPredicted RBP15.25■□□□□ 0.03
PKP3-209ENST00000533069 CGB2Q6NT52 195 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 SLC30A6Q6NXT4 461 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 DDIASQ8IXT1 998 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 LIX1Q8N485 282 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 OR7G2Q8NG99 324 aa15.25■□□□□ 0.03
PKP3-209ENST00000533069 OR2T11Q8NH01 316 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms