RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 POLR2J3Q9H1A7 115 aaKnown RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 TPT1P8Q9HAU6 139 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 CNOT2Q9NZN8 540 aaKnown RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 ANGPT4Q9Y264 503 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 OR10H1Q9Y4A9 318 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 CSNK1G3Q9Y6M4 447 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 MUC6Q6W4X9 2439 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 TRAPPC13A5PLN9 417 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 OR5K4A6NMS3 321 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 MAGEB17A8MXT2 336 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 AIPO00170 330 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 DSCR3O14972 297 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 PCDHGA12O60330 932 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 SPARCP09486 303 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 S100A11P31949 105 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 IFNGR2P38484 337 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 RFX2P48378 723 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 DAPP51397 102 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 RAB8AP61006 207 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 LMAN2Q12907 356 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 ITPRIPL2Q3MIP1 535 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 TTLL9Q3SXZ7 439 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 ARSIQ5FYB1 569 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 MEDAGQ5VYS4 303 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 ANKRD34AQ69YU3 496 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 KRT77Q7Z794 578 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 PDZD3Q86UT5 571 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 TMEM145Q8NBT3 493 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 ACVR1CQ8NER5 493 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 INTS12Q96CB8 462 aaKnown RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 OR5M11Q96RB7 305 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 MFFQ9GZY8 342 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 IPPKQ9H8X2 491 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 ASF1BQ9NVP2 202 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 DZANK1Q9NVP4 752 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 MRTO4Q9UKD2 239 aaKnown RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 POM121BA6NF01 834 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 F5H0A9 414 aaPredicted RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 SLC7A4O43246 635 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 SMAD6O43541 496 aaKnown RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 KAT7O95251 611 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 IGSF6O95976 241 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 F11P03951 625 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 HNRNPA1P09651 372 aaKnown RBP eCLIP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 LAMP2P13473 410 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 CELP19835 753 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 XKP51811 444 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 RAB4BP61018 213 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 RNF4P78317 190 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 CNTN1Q12860 1018 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 C4orf46Q504U0 113 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 NKAPLQ5M9Q1 402 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 DCST1Q5T197 706 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 KHDRBS2Q5VWX1 349 aaKnown RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 FAM180BQ6P0A1 224 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 SFTPA1Q8IWL2 248 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 TCEANCQ8N8B7 351 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 NLGN4YQ8NFZ3 816 aaPredicted RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 OR7G2Q8NG99 324 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 WFDC5Q8TCV5 224 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 NETO1Q8TDF5 533 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 ATOH1Q92858 354 aaPredicted RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 ARL11Q969Q4 196 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 LINGO1Q96FE5 620 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 HSPA12BQ96MM6 686 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 DDOQ99489 341 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 RHNO1Q9BSD3 238 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 POLR1EQ9GZS1 481 aaKnown RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 OSBPL2Q9H1P3 480 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 KCNK12Q9HB15 430 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 VAPAQ9P0L0 249 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 CRLS1Q9UJA2 301 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 ASF1AQ9Y294 204 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 MTCH2Q9Y6C9 303 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 TRIP11Q15643 1979 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 CEP250Q9BV73 2442 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 LINC00587B1AMM8 73 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 C2CD4DB7Z1M9 353 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 TNFRSF10BO14763 440 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 WNT9AO14904 365 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 RAB36O95755 333 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 PRPS2P11908 318 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 AGTR1P30556 359 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 RBM34P42696 430 aaKnown RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 SGCGQ13326 291 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 PDGFRLQ15198 375 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 ZNF124Q15973 351 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 TSTD2Q5T7W7 516 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 CEP68Q76N32 757 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 GPR155Q7Z3F1 870 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 RIMKLAQ8IXN7 391 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 AQP11Q8NBQ7 271 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 C2CD4AQ8NCU7 369 aaPredicted RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 ACOT11Q8WXI4 607 aaPredicted RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 CNOT9Q92600 299 aaKnown RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 L3HYPDHQ96EM0 354 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 WDR77Q9BQA1 342 aaPredicted RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 C1QTNF6Q9BXI9 259 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 SLC38A1Q9H2H9 487 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 FBXO10Q9UK96 956 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms