RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 TIMM22Q9Y584 194 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 MED13LQ71F56 2210 aa15.31■□□□□ 0.04
CPSF1-207ENST00000531727 SERTM1A2A2V5 107 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 CCDC151A5D8V7 595 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 TSPAN2O60636 221 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 PYGBP11216 843 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 AGFG1P52594 562 aaKnown RBP15.3■□□□□ 0.04
CPSF1-207ENST00000531727 CORO7P57737 925 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 PSPHP78330 225 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 EFR3AQ14156 821 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 CEBPEQ15744 281 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 ENPP6Q6UWR7 440 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 NPSR1Q6W5P4 371 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 KIF18BQ86Y91 864 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 PLCZ1Q86YW0 608 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 RDH11Q8TC12 318 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 DTNBP1Q96EV8 351 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 KCNA7Q96RP8 456 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 ADOQ96SZ5 270 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 FOXC2Q99958 501 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 TUBA1CQ9BQE3 449 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 EBPLQ9BY08 206 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 SHCBP1LQ9BZQ2 653 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 GSTO2Q9H4Y5 243 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 SIRT5Q9NXA8 310 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 JKAMPQ9P055 326 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 PSMC3IPQ9P2W1 217 aaPredicted RBP15.3■□□□□ 0.04
CPSF1-207ENST00000531727 ST6GALNAC2Q9UJ37 374 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 WIF1Q9Y5W5 379 aa15.3■□□□□ 0.04
CPSF1-207ENST00000531727 DOCK7Q96N67 2140 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 EEF1E1-BLOC1S5C9J1V9 151 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 H0Y3Z8 333 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 EEF1E1O43324 174 aaKnown RBP15.29■□□□□ 0.04
CPSF1-207ENST00000531727 PLOD3O60568 738 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 NME6O75414 186 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-207ENST00000531727 ANXA4P09525 319 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-207ENST00000531727 TMIGD3P0DMS9 266 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-207ENST00000531727 TACR1P25103 407 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 IL12BP29460 328 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 SRD5A2P31213 254 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 MPIP34949 423 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 KRT20P35900 424 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 SLCO1A2P46721 670 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 GFRA1P56159 465 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 BTKQ06187 659 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 SLC29A2Q14542 456 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 DAZAP2Q15038 168 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-207ENST00000531727 SCIMPQ6UWF3 145 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 IFNEQ86WN2 208 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 TRIM42Q8IWZ5 723 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 FAM9CQ8IZT9 166 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 CNPY4Q8N129 248 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 CEP112Q8N8E3 955 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 MZB1Q8WU39 189 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 RNF138Q8WVD3 245 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 RMND5BQ96G75 393 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-207ENST00000531727 UCN2Q96RP3 112 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 STMN4Q9H169 189 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-207ENST00000531727 CXXC4Q9H2H0 198 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 LIME1Q9H400 295 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 FOLH1BQ9HBA9 442 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 CCM2LQ9NUG4 571 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-207ENST00000531727 TAS2R10Q9NYW0 307 aa15.29■□□□□ 0.04
CPSF1-207ENST00000531727 TUBAL3A6NHL2 446 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 KIF2AO00139 706 aaPredicted RBP15.28■□□□□ 0.04
CPSF1-207ENST00000531727 UBFD1O14562 309 aaKnown RBP15.28■□□□□ 0.04
CPSF1-207ENST00000531727 FAM153BP0C7A2 387 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 DDCP20711 480 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 DGKQP52824 942 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 PNLIPRP2P54317 469 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 SORDQ00796 357 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 SRYQ05066 204 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 ZNF763Q0D2J5 394 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 FAM153CQ494X1 144 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 SPDYAQ5MJ70 313 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 LARP4Q71RC2 724 aaKnown RBP eCLIP15.28■□□□□ 0.04
CPSF1-207ENST00000531727 ADGRE4PQ86SQ3 457 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 CDC20BQ86Y33 519 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 OR7G2Q8NG99 324 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 GOT1L1Q8NHS2 421 aaPredicted RBP15.28■□□□□ 0.04
CPSF1-207ENST00000531727 CCDC126Q96EE4 140 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 ZFP3Q96NJ6 502 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 BBS4Q96RK4 519 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 TM9SF2Q99805 663 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 TXLNGYQ9BZA5 131 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 MID1IP1Q9NPA3 183 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 TAS2R9Q9NYW1 312 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 SENP1Q9P0U3 644 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 TBK1Q9UHD2 729 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 DCDC2Q9UHG0 476 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 FBXL2Q9UKC9 423 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 EMCNQ9ULC0 261 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 EDARQ9UNE0 448 aa15.28■□□□□ 0.04
CPSF1-207ENST00000531727 MRPS18CQ9Y3D5 142 aaKnown RBP15.28■□□□□ 0.04
CPSF1-207ENST00000531727 MYO1GB0I1T2 1018 aa15.27■□□□□ 0.04
CPSF1-207ENST00000531727 G3V2L1 256 aa15.27■□□□□ 0.04
CPSF1-207ENST00000531727 RCBTB2O95199 551 aa15.27■□□□□ 0.04
CPSF1-207ENST00000531727 EPXP11678 715 aa15.27■□□□□ 0.04
CPSF1-207ENST00000531727 GRK2P25098 689 aa15.27■□□□□ 0.04
CPSF1-207ENST00000531727 LHX2P50458 406 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms