RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 SFXN2Q96NB2 322 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 UCN2Q96RP3 112 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 ADOQ96SZ5 270 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 BRF2Q9HAW0 419 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 PFDN4Q9NQP4 134 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 BEX4Q9NWD9 120 aaPredicted RBP16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 PRODH2Q9UF12 536 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 ZNF225Q9UK10 706 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 UTS2RQ9UKP6 389 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 PSME2Q9UL46 239 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 GPR55Q9Y2T6 319 aaPredicted RBP16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 WIF1Q9Y5W5 379 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 ZNF780BQ9Y6R6 833 aa16.7■□□□□ 0.26
SSSCA1-206ENST00000531405 ROS1P08922 2347 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 A8MXE2 369 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 TNFSF13O75888 250 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 OR4F21O95013 312 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 ESRRBO95718 433 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 OTCP00480 354 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 INHBBP09529 407 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 ZNF708P17019 499 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 SRD5A2P31213 254 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 ZNF628Q5EBL2 1059 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 AAGABQ6PD74 315 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 NPSR1Q6W5P4 371 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 CXorf67Q86X51 503 aaPredicted RBP16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 CCDC116Q8IYX3 515 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 SMPDL3BQ92485 455 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 TMCO6Q96DC7 493 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 FAIM2Q9BWQ8 316 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 PIGMQ9H3S5 423 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 C6orf203Q9P0P8 240 aaPredicted RBP16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 DKKL1Q9UK85 242 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 PACSIN3Q9UKS6 424 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 SNX6Q9UNH7 406 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 TESMINQ9Y4I5 508 aa16.69■□□□□ 0.26
SSSCA1-206ENST00000531405 A0A1W2PNV4 684 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 A8MT66 165 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 CASKO14936 926 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 TSPAN2O60636 221 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 INHBAP08476 426 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 SBK3P0C264 359 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 CT45A8P0DMV1 189 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 CT45A9P0DMV2 189 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 CHN1P15882 459 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 DIO3P55073 304 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 FAM27E3Q08E93 113 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 TSNAXIP1Q2TAA8 658 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 CT45A2Q5DJT8 189 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 CLEC9AQ6UXN8 241 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 OR9A2Q8NGT5 310 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 SLC35A4Q96G79 324 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 BTBD9Q96Q07 612 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 LRRC1Q9BTT6 524 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 ACBD3Q9H3P7 528 aa16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 EIF3LQ9Y262 564 aaKnown RBP16.68■□□□□ 0.26
SSSCA1-206ENST00000531405 SIAH2O43255 324 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 ZIC3O60481 467 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 SMNDC1O75940 238 aaKnown RBP eCLIP16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 IL3P08700 152 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 CTAGE8P0CG41 777 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 GRK2P25098 689 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 GAB1Q13480 694 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 C8orf74Q6P047 294 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 VWA1Q6PCB0 445 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 SYT10Q6XYQ8 523 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 LARP4Q71RC2 724 aaKnown RBP eCLIP16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 ZNF572Q7Z3I7 529 aaPredicted RBP16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 CTAGE4Q8IX94 777 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 UBQLNLQ8IYU4 475 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 CDYL2Q8N8U2 506 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 OR4N2Q8NGD1 307 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 ZNF675Q8TD23 568 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 EXOSC8Q96B26 276 aaKnown RBP16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 EFHD2Q96C19 240 aaPredicted RBP16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 VSTM2LQ96N03 204 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 PAFAH2Q99487 392 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 MRPL57Q9BQC6 102 aaKnown RBP16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 MRPL46Q9H2W6 279 aaKnown RBP16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 ZNF395Q9H8N7 513 aaPredicted RBP16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 KLHL28Q9NXS3 571 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 VPS29Q9UBQ0 182 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 NDRG3Q9UGV2 375 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 TRPS1Q9UHF7 1281 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 DLGAP4Q9Y2H0 992 aa16.67■□□□□ 0.26
SSSCA1-206ENST00000531405 MANBAO00462 879 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 HCRTR2O43614 444 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 ABCB7O75027 752 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 CHMP24386 653 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 DPP4P27487 766 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 IL12BP29460 328 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 KRT20P35900 424 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 GAS1P54826 345 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 B3GALT5-AS1P59052 145 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 TRA2BP62995 288 aaKnown RBP16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 RAE1P78406 368 aaKnown RBP16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 Q5PR19 223 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 SHEQ5VZ18 495 aa16.66■□□□□ 0.26
SSSCA1-206ENST00000531405 P4HA3Q7Z4N8 544 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms