RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 ATG5Q9H1Y0 275 aa14.66□□□□□ -0.06
PCDHA4-203ENST00000530339 KCNK12Q9HB15 430 aa14.66□□□□□ -0.06
PCDHA4-203ENST00000530339 IL37Q9NZH6 218 aa14.66□□□□□ -0.06
PCDHA4-203ENST00000530339 IL17CQ9P0M4 197 aa14.66□□□□□ -0.06
PCDHA4-203ENST00000530339 KLHL9Q9P2J3 617 aa14.66□□□□□ -0.06
PCDHA4-203ENST00000530339 GPR52Q9Y2T5 361 aa14.66□□□□□ -0.06
PCDHA4-203ENST00000530339 GPR89AB7ZAQ6 455 aa14.66□□□□□ -0.06
PCDHA4-203ENST00000530339 GPR89BP0CG08 455 aa14.66□□□□□ -0.06
PCDHA4-203ENST00000530339 RBMXP38159 391 aaKnown RBP14.66□□□□□ -0.06
PCDHA4-203ENST00000530339 ART1P52961 327 aa14.66□□□□□ -0.06
PCDHA4-203ENST00000530339 SELENOVP59797 346 aa14.66□□□□□ -0.06
PCDHA4-203ENST00000530339 NHSL2Q5HYW2 709 aa14.66□□□□□ -0.06
PCDHA4-203ENST00000530339 MLIPQ5VWP3 458 aa14.66□□□□□ -0.06
PCDHA4-203ENST00000530339 HMGN2P46Q86SG4 172 aa14.66□□□□□ -0.06
PCDHA4-203ENST00000530339 MRI1Q9BV20 369 aa14.66□□□□□ -0.06
PCDHA4-203ENST00000530339 A0A1W2PQ09 198 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 CSTAP01040 98 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 HLA-EP13747 358 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 RAB28P51157 221 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 AGAP7PQ5VUJ5 663 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 RABEPKQ7Z6M1 372 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 LSMEM2Q8N112 164 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 TRIB2Q92519 343 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 PAAF1Q9BRP4 392 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 NTMT1Q9BV86 223 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 C2orf78A6NCI8 922 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 A8MUA0 341 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 EDIL3O43854 480 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 CDC40O60508 579 aaKnown RBP eCLIP14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 DRD5P21918 477 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 C21orf33P30042 268 aaPredicted RBP14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 TNFSF8P32971 234 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 MAGEA3P43357 314 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 CHRDL2Q6WN34 429 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 DGLUCYQ7Z3D6 616 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 GPAT4Q86UL3 456 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 CPXM2Q8N436 756 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 CD300LFQ8TDQ1 290 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 MAFIPQ8WZ33 124 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 SMARCD2Q92925 531 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 SNAPC3Q92966 411 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 CNN2Q99439 309 aaKnown RBP14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 LDAHQ9H6V9 325 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 MTHFD2LQ9H903 347 aaPredicted RBP14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 CSNK1G1Q9HCP0 422 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 H3BUI4 141 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 RNF13O43567 381 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 PLATP00750 562 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 SYPP08247 313 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 CLUP10909 449 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 ID2Q02363 134 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 CRTC1Q6UUV9 634 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 SHFQ7M4L6 423 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 MAVSQ7Z434 540 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 OR6N1Q8NGY5 312 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 TRMT10AQ8TBZ6 339 aaKnown RBP14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 GTF2H4Q92759 462 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 C7orf34Q96L11 122 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 NUBP2Q9Y5Y2 271 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 CYBAP13498 195 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 POLR2CP19387 275 aaPredicted RBP14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 PGCP20142 388 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 GABRA3P34903 492 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 USF2Q15853 346 aaPredicted RBP14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 BCL7AQ4VC05 210 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 MORN1Q5T089 497 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 METTL4Q8N3J2 472 aa14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 FAM46AQ96IP4 442 aaKnown RBP14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 MRPL15Q9P015 296 aaKnown RBP14.65□□□□□ -0.06
PCDHA4-203ENST00000530339 RTCAO00442 366 aaKnown RBP14.65□□□□□ -0.07
PCDHA4-203ENST00000530339 PER3P56645 1201 aa14.65□□□□□ -0.07
PCDHA4-203ENST00000530339 RAB5BP61020 215 aa14.65□□□□□ -0.07
PCDHA4-203ENST00000530339 DHCR24Q15392 516 aa14.65□□□□□ -0.07
PCDHA4-203ENST00000530339 RAB41Q5JT25 222 aa14.65□□□□□ -0.07
PCDHA4-203ENST00000530339 PLBD1Q6P4A8 553 aa14.65□□□□□ -0.07
PCDHA4-203ENST00000530339 LCTLQ6UWM7 567 aa14.65□□□□□ -0.07
PCDHA4-203ENST00000530339 CBLL1Q75N03 491 aa14.65□□□□□ -0.07
PCDHA4-203ENST00000530339 ZNF551Q7Z340 670 aaPredicted RBP14.65□□□□□ -0.07
PCDHA4-203ENST00000530339 ARHGAP12Q8IWW6 846 aa14.65□□□□□ -0.07
PCDHA4-203ENST00000530339 TESCQ96BS2 214 aa14.65□□□□□ -0.07
PCDHA4-203ENST00000530339 PDLIM5Q96HC4 596 aaKnown RBP14.65□□□□□ -0.07
PCDHA4-203ENST00000530339 MROQ9BYG7 248 aa14.65□□□□□ -0.07
PCDHA4-203ENST00000530339 CPEB1Q9BZB8 566 aaKnown RBP14.65□□□□□ -0.07
PCDHA4-203ENST00000530339 PCDHA9Q9Y5H5 950 aa14.65□□□□□ -0.07
PCDHA4-203ENST00000530339 RNGTTO60942 597 aaKnown RBP14.64□□□□□ -0.07
PCDHA4-203ENST00000530339 PRKXP51817 358 aa14.64□□□□□ -0.07
PCDHA4-203ENST00000530339 TMEM107Q6UX40 140 aa14.64□□□□□ -0.07
PCDHA4-203ENST00000530339 BORCS7-ASMTA0A0B4J1R7 106 aa14.64□□□□□ -0.07
PCDHA4-203ENST00000530339 EIF1AYO14602 144 aaKnown RBP14.64□□□□□ -0.07
PCDHA4-203ENST00000530339 CASC3O15234 703 aaKnown RBP14.64□□□□□ -0.07
PCDHA4-203ENST00000530339 CNMDO75829 334 aa14.64□□□□□ -0.07
PCDHA4-203ENST00000530339 PAK4O96013 591 aaPredicted RBP14.64□□□□□ -0.07
PCDHA4-203ENST00000530339 C6P13671 934 aa14.64□□□□□ -0.07
PCDHA4-203ENST00000530339 EIF1AXP47813 144 aaKnown RBP14.64□□□□□ -0.07
PCDHA4-203ENST00000530339 TRA2BP62995 288 aaKnown RBP14.64□□□□□ -0.07
PCDHA4-203ENST00000530339 WASF3Q9UPY6 502 aa14.64□□□□□ -0.07
PCDHA4-203ENST00000530339 ZNF14P17017 642 aaPredicted RBP14.64□□□□□ -0.07
PCDHA4-203ENST00000530339 GATMP50440 423 aa14.64□□□□□ -0.07
PCDHA4-203ENST00000530339 ARHGAP19Q14CB8 494 aa14.64□□□□□ -0.07
PCDHA4-203ENST00000530339 METTL11BQ5VVY1 283 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms