RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 SLC26A1Q9H2B4 701 aa13.42□□□□□ -0.26
TTC39A-216ENST00000530004 ADAP2Q9NPF8 381 aa13.42□□□□□ -0.26
TTC39A-216ENST00000530004 CNOT11Q9UKZ1 510 aaKnown RBP13.42□□□□□ -0.26
TTC39A-216ENST00000530004 CLDN16Q9Y5I7 305 aa13.42□□□□□ -0.26
TTC39A-216ENST00000530004 KCNE3Q9Y6H6 103 aa13.42□□□□□ -0.26
TTC39A-216ENST00000530004 SCN2AQ99250 2005 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 C9J4A7 227 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 SOCS2O14508 198 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 GNGT2O14610 69 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 PDE9AO76083 593 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 PRSS23O95084 383 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 IFI6P09912 130 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 ZNF23P17027 643 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 ATP6V1C1P21283 382 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 CRISP3P54108 245 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 VLDLRP98155 873 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 OCA2Q04671 838 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 GNA13Q14344 377 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 MED25Q71SY5 747 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 VWA5B2Q8N398 1253 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 CBR4Q8N4T8 237 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 STT3BQ8TCJ2 826 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 SPPL2AQ8TCT8 520 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 SLC9A6Q92581 669 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 RIT1Q92963 219 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 NKD1Q969G9 470 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 TMBIM1Q969X1 311 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 CTHRC1Q96CG8 243 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 RBM18Q96H35 190 aaKnown RBP13.41□□□□□ -0.26
TTC39A-216ENST00000530004 NAF1Q96HR8 494 aaKnown RBP13.41□□□□□ -0.26
TTC39A-216ENST00000530004 DGAT2Q96PD7 388 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 TGIF2Q9GZN2 237 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 RUBCNLQ9H714 662 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 CXorf21Q9HAI6 301 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 LANCL2Q9NS86 450 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 ABCG2Q9UNQ0 655 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 SDK2Q58EX2 2172 aa13.41□□□□□ -0.26
TTC39A-216ENST00000530004 FER1L5A0AVI2 2057 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 VSTM2BA6NLU5 285 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 DUXAA6NLW8 204 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 ACOX3O15254 700 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 CNOT3O75175 753 aaKnown RBP13.4□□□□□ -0.26
TTC39A-216ENST00000530004 CHRM4P08173 479 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 ZGLP1P0C6A0 271 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 LIPCP11150 499 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 TCN2P20062 427 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 STAT5AP42229 794 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 MAP4K2Q12851 820 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 EXOSC7Q15024 291 aaKnown RBP13.4□□□□□ -0.26
TTC39A-216ENST00000530004 NCF4Q15080 339 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 GPAT3Q53EU6 434 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 IFI44LQ53G44 452 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 ATAD3BQ5T9A4 648 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 PPP4R4Q6NUP7 873 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 OLIG3Q7RTU3 272 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 GALNT12Q8IXK2 581 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 SLC16A11Q8NCK7 471 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 BBS10Q8TAM1 723 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 CT55Q8WUE5 264 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 ZNF570Q96NI8 536 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 COL21A1Q96P44 957 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 ZNF607Q96SK3 696 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 NECTIN3Q9NQS3 549 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 C14orf105Q9NVL8 296 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 GPN3Q9UHW5 284 aaPredicted RBP13.4□□□□□ -0.26
TTC39A-216ENST00000530004 BAG5Q9UL15 447 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 DIRAS1O95057 198 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 MFN2O95140 757 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 TNFRSF1BP20333 461 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 STT3AP46977 705 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 IST1P53990 364 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 SERTAD2Q14140 314 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 CYP27C1Q4G0S4 372 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 CMPK2Q5EBM0 449 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 MFSD4BQ5TF39 518 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 C16orf62Q7Z3J2 963 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 KRT73Q86Y46 540 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 ARMC8Q8IUR7 673 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 OR52R1Q8NGF1 315 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 CDS1Q92903 461 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 SLC35A4Q96G79 324 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 C7orf34Q96L11 122 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 PTCHD1Q96NR3 888 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 SPSB2Q99619 263 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 WDR54Q9H977 334 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 BCL2L10Q9HD36 194 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 EXD2Q9NVH0 621 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 GIN1Q9NXP7 522 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 LIPT1Q9Y234 373 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 PADI2Q9Y2J8 665 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 MMACHCQ9Y4U1 282 aa13.4□□□□□ -0.26
TTC39A-216ENST00000530004 AHCTF1Q8WYP5 2266 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 COQ9O75208 318 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 SERPINB7O75635 380 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 H6PDO95479 791 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 CBX7O95931 251 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 AGR2O95994 175 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 IFNA16P05015 189 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 RAB40ALP0C0E4 278 aa13.39□□□□□ -0.27
TTC39A-216ENST00000530004 ACP2P11117 423 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms