RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 UGT2B11O75310 529 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 SEMA7AO75326 666 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 REM1O75628 298 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 ZIC2O95409 532 aaPredicted RBP11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 STSP08842 583 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 EPHA3P29320 983 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 CASP3P42574 277 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 KCNJ2P63252 427 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 ZNHIT3Q15649 155 aaPredicted RBP11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 LSM12Q3MHD2 195 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 CYP27C1Q4G0S4 372 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 CMPK2Q5EBM0 449 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 BICRALQ6AI39 1079 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 DESI1Q6ICB0 168 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 TMEM81Q6P7N7 255 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 MAVSQ7Z434 540 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 SLC22A16Q86VW1 577 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 GHDCQ8N2G8 530 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 NUP43Q8NFH3 380 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 OR4N2Q8NGD1 307 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 OR52N2Q8NGI0 321 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 PSMA8Q8TAA3 256 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 ACTRT2Q8TDY3 377 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 DYDC1Q8WWB3 177 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 HOXB13Q92826 284 aaPredicted RBP11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 SLC35A4Q96G79 324 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 COL21A1Q96P44 957 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 LMF2Q9BU23 707 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 ZDHHC11Q9H8X9 412 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 ZFP64Q9NPA5 681 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 SLCO1B3Q9NPD5 702 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 SIRT3Q9NTG7 399 aaPredicted RBP11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 AIG1Q9NVV5 245 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 BOKQ9UMX3 212 aaPredicted RBP11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 ZNF835Q9Y2P0 537 aa11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 NUP214P35658 2090 aaPredicted RBP11.63□□□□□ -0.55
CCDC90B-216ENST00000529856 GTF3C1Q12789 2109 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 TRIM3O75382 744 aaPredicted RBP11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 SNX4O95219 450 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 ALDOCP09972 364 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 MAP3K8P41279 467 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 PNLIPRP2P54317 469 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 PRKAG1P54619 331 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 WNT3P56703 355 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 RBPJQ06330 500 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 GAB1Q13480 694 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 PGS1Q32NB8 556 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 SLC9B1Q4ZJI4 515 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 TMEM198Q66K66 360 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 WDR53Q7Z5U6 358 aaPredicted RBP11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 SPPL2CQ8IUH8 684 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 CHERPQ8IWX8 916 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 TMEM251Q8N6I4 163 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 OR8J2Q8NGG1 315 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 CKAP2Q8WWK9 683 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 TESCQ96BS2 214 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 FAM120BQ96EK7 910 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 GIMAP5Q96F15 307 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 MS4A4EQ96PG1 132 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 NODALQ96S42 347 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 ADOQ96SZ5 270 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 DOHHQ9BU89 302 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 DEFB127Q9H1M4 99 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 EQTNQ9NQ60 294 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 CBLCQ9ULV8 474 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 SLC5A6Q9Y289 635 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 OR10H1Q9Y4A9 318 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 GPR45Q9Y5Y3 372 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 USH1CQ9Y6N9 552 aa11.62□□□□□ -0.55
CCDC90B-216ENST00000529856 HIVEP3Q5T1R4 2406 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 UQCRHLA0A096LP55 91 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 LRRC3CA6NJW4 275 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 SCN2BO60939 215 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 AGFG2O95081 481 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 TGDSO95455 350 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 C6orf47O95873 294 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 RFPL3SP0C7P2 107 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 IL12BP29460 328 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 GABRA3P34903 492 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 KRT20P35900 424 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 PTGDSP41222 190 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 MAGEA5P43359 124 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 CCT3P49368 545 aaKnown RBP11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 CLNS1AP54105 237 aaKnown RBP11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 UFM1P61960 85 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 PHC1P78364 1004 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 PRR5P85299 388 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 HSF1Q00613 529 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 SNTA1Q13424 505 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 EFR3AQ14156 821 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 SLC10A1Q14973 349 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 C4orf17Q53FE4 359 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 NXNQ6DKJ4 435 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 OR4F3Q6IEY1 312 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 SLC30A6Q6NXT4 461 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 ZCCHC12Q6PEW1 402 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 EPGNQ6UW88 154 aa11.61□□□□□ -0.55
CCDC90B-216ENST00000529856 Q6ZPB1 254 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms