RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 REG4Q9BYZ8 158 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 BRINP2Q9C0B6 783 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 CAB39LQ9H9S4 337 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 PSD3Q9NYI0 1048 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 MOCS1Q9NZB8 636 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 PRODH2Q9UF12 536 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 MTO1Q9Y2Z2 717 aaKnown RBP8.12□□□□□ -1.11
VPS11-203ENST00000529545 TSC22D4Q9Y3Q8 395 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 NBEAL1Q6ZS30 2694 aa8.12□□□□□ -1.11
VPS11-203ENST00000529545 SONP18583 2426 aaKnown RBP8.11□□□□□ -1.11
VPS11-203ENST00000529545 FRG2CA6NGY1 282 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 EFCAB8A8MWE9 144 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 HS3ST1O14792 307 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 PGRMC2O15173 223 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 CD5LO43866 347 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 UGT2B11O75310 529 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 GUCY1B2O75343 617 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 REM1O75628 298 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 SOX30O94993 753 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 GBAP04062 536 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 CPMP14384 443 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 DRD5P21918 477 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 CCKARP32238 428 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 KRT20P35900 424 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 PTGDSP41222 190 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 KIR2DL2P43627 348 aaPredicted RBP8.11□□□□□ -1.11
VPS11-203ENST00000529545 PPICP45877 212 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 RPS4XP62701 263 aaKnown RBP8.11□□□□□ -1.11
VPS11-203ENST00000529545 HMGCS1Q01581 520 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 OCRLQ01968 901 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 PDIA2Q13087 525 aaKnown RBP8.11□□□□□ -1.11
VPS11-203ENST00000529545 SLMAPQ14BN4 828 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 EXOC3L2Q2M3D2 409 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 OXLD1Q5BKU9 147 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 C10orf62Q5T681 223 aaPredicted RBP8.11□□□□□ -1.11
VPS11-203ENST00000529545 TEX9Q8N6V9 391 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 ZNF610Q8N9Z0 462 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 FBXO36Q8NEA4 188 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 OR4K17Q8NGC6 315 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 ACTRT1Q8TDG2 376 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 UBTD2Q8WUN7 234 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 IGFBPL1Q8WX77 278 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 GTPBP3Q969Y2 492 aaKnown RBP8.11□□□□□ -1.11
VPS11-203ENST00000529545 COL21A1Q96P44 957 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 SERPINI1Q99574 410 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 PINK1Q9BXM7 581 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 ZNF717Q9BY31 904 aaPredicted RBP8.11□□□□□ -1.11
VPS11-203ENST00000529545 ITPAQ9BY32 194 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 STMN4Q9H169 189 aaPredicted RBP8.11□□□□□ -1.11
VPS11-203ENST00000529545 ALG9Q9H6U8 611 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 AHSPQ9NZD4 102 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 EHD3Q9NZN3 535 aa8.11□□□□□ -1.11
VPS11-203ENST00000529545 A0A087X1B8 175 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 A0A1W2PS29 197 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 OR6C70A6NIJ9 312 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 SYCE1LA8MT33 242 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 A8MV72 311 aaPredicted RBP8.1□□□□□ -1.11
VPS11-203ENST00000529545 H0YIV9 168 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 LINC01387J3KSC0 135 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 PHF1O43189 567 aaPredicted RBP8.1□□□□□ -1.11
VPS11-203ENST00000529545 KLF4O43474 513 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 UGDHO60701 494 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 TNFRSF21O75509 655 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 SEMA3DO95025 777 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 WISP3O95389 354 aaPredicted RBP8.1□□□□□ -1.11
VPS11-203ENST00000529545 CGAP01215 116 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 FCGR2AP12318 317 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 CSNK2A2P19784 350 aaPredicted RBP8.1□□□□□ -1.11
VPS11-203ENST00000529545 S1PR1P21453 382 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 LOXP28300 417 aaPredicted RBP8.1□□□□□ -1.11
VPS11-203ENST00000529545 IL12BP29460 328 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 ARL1P40616 181 aaPredicted RBP8.1□□□□□ -1.11
VPS11-203ENST00000529545 DSCR4P56555 118 aaPredicted RBP8.1□□□□□ -1.11
VPS11-203ENST00000529545 RAB10P61026 200 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 RPS3AP61247 264 aaKnown RBP8.1□□□□□ -1.11
VPS11-203ENST00000529545 MRPS22P82650 360 aaKnown RBP8.1□□□□□ -1.11
VPS11-203ENST00000529545 MAP4K2Q12851 820 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 EFR3AQ14156 821 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 CAPRIN1Q14444 709 aaKnown RBP8.1□□□□□ -1.11
VPS11-203ENST00000529545 EXOSC7Q15024 291 aaKnown RBP8.1□□□□□ -1.11
VPS11-203ENST00000529545 CPSF6Q16630 551 aaKnown RBP eCLIP8.1□□□□□ -1.11
VPS11-203ENST00000529545 RAET1LQ5VY80 246 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 OR5M10Q6IEU7 315 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 FAM111BQ6SJ93 734 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 RAPH1Q70E73 1250 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 PAGE2Q7Z2X7 111 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 TBC1D1Q86TI0 1168 aaPredicted RBP8.1□□□□□ -1.11
VPS11-203ENST00000529545 PLPP7Q8NBV4 271 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 FIG4Q92562 907 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 TMBIM1Q969X1 311 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 ZBED6CLQ96FA7 236 aaPredicted RBP8.1□□□□□ -1.11
VPS11-203ENST00000529545 PLPPR2Q96GM1 343 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 UBXN10Q96LJ8 280 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 CPNE1Q99829 537 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 LRRC1Q9BTT6 524 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 PRRG4Q9BZD6 226 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 AMBRA1Q9C0C7 1298 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 DDX47Q9H0S4 455 aaKnown RBP8.1□□□□□ -1.11
VPS11-203ENST00000529545 NMRAL1Q9HBL8 299 aa8.1□□□□□ -1.11
VPS11-203ENST00000529545 HEY2Q9UBP5 337 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms