RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 ELAVL4P26378 380 aaKnown RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 CHRNB4P30926 498 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 SOAT1P35610 550 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 RPL3P39023 403 aaKnown RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 CASP3P42574 277 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 PPICP45877 212 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 ASMTP46597 345 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 PSMD4P55036 377 aaKnown RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 CORO7P57737 925 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 NUP107P57740 925 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 SRYQ05066 204 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 DUSP8Q13202 625 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 RCAN2Q14206 197 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 SF3B4Q15427 424 aaKnown RBP eCLIP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 PDCD2Q16342 344 aaPredicted RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 DECR1Q16698 335 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 ARL13AQ5H913 290 aaPredicted RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 WIPI1Q5MNZ9 446 aaPredicted RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 HHATQ5VTY9 493 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 PPP4R4Q6NUP7 873 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 SLC30A6Q6NXT4 461 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 LYPD8Q6UX82 237 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 MEX3BQ6ZN04 569 aaKnown RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 CHMP1BQ7LBR1 199 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 TRIM46Q7Z4K8 759 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 GDF7Q7Z4P5 450 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 R3HCC1LQ7Z5L2 792 aaKnown RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 FGD2Q7Z6J4 655 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 CROCCP2Q86T23 111 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 YRDCQ86U90 279 aaKnown RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 CCDC71Q8IV32 467 aaPredicted RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 MCEMP1Q8IX19 187 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 ZNF441Q8N8Z8 693 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 C17orf47Q8NEP4 570 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 OR7G2Q8NG99 324 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 FBXO30Q8TB52 745 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 SLC9A6Q92581 669 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 ZBED6CLQ96FA7 236 aaPredicted RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 GNRHR2Q96P88 292 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 NODALQ96S42 347 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 SECISBP2Q96T21 854 aaKnown RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 C1orf50Q9BV19 199 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 GALNT9Q9HCQ5 603 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 KCNJ16Q9NPI9 418 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 QPCTLQ9NXS2 382 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 PPP4R1LQ9P1A2 415 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 LGALS13Q9UHV8 139 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 RNF6Q9Y252 685 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 EIF3LQ9Y262 564 aaKnown RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 TMED5Q9Y3A6 229 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 SNX8Q9Y5X2 465 aa8.32□□□□□ -1.08
CMTM1-210ENST00000528441 SPTAN1Q13813 2472 aaKnown RBP8.32□□□□□ -1.08
CMTM1-210ENST00000528441 CACNA1DQ01668 2161 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 SERTM1A2A2V5 107 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 NKX2-6A6NCS4 301 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 LRRC3CA6NJW4 275 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 H0Y3Z8 333 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 UGT2B11O75310 529 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 SLITRK5O94991 958 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 IGHG3P01860 377 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 BPGMP07738 259 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 HPGDP15428 266 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 NAGAP17050 411 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 EFNA1P20827 205 aaPredicted RBP8.31□□□□□ -1.08
CMTM1-210ENST00000528441 AGAP20933 346 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 DRD5P21918 477 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 SERPINB5P36952 375 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 ZFP36L2P47974 494 aaKnown RBP8.31□□□□□ -1.08
CMTM1-210ENST00000528441 EMDP50402 254 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 PSPHP78330 225 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 PRR20EP86478 221 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 PRR20CP86479 221 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 PRR20DP86480 221 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 PRR20BP86481 221 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 PRR20AP86496 221 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 FOXO1Q12778 655 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 CHI3L2Q15782 390 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 ZNF630Q2M218 657 aaPredicted RBP8.31□□□□□ -1.08
CMTM1-210ENST00000528441 VPS26BQ4G0F5 336 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 EIPR1Q53HC9 387 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 FBXW10Q5XX13 1052 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 KANK2Q63ZY3 851 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 DESI1Q6ICB0 168 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 OR5M10Q6IEU7 315 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 FAM71E1Q6IPT2 247 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 GALNT18Q6P9A2 607 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 SH2D5Q6ZV89 423 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 ZNF551Q7Z340 670 aaPredicted RBP8.31□□□□□ -1.08
CMTM1-210ENST00000528441 P4HA3Q7Z4N8 544 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 IFNEQ86WN2 208 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 PM20D2Q8IYS1 436 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 RPRMLQ8N4K4 120 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 SIMC1Q8NDZ2 872 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 NEIL3Q8TAT5 605 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 MGARPQ8TDB4 240 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 GPR151Q8TDV0 419 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 ABTB1Q969K4 478 aaPredicted RBP8.31□□□□□ -1.08
CMTM1-210ENST00000528441 CIDECQ96AQ7 238 aaPredicted RBP8.31□□□□□ -1.08
CMTM1-210ENST00000528441 ERP27Q96DN0 273 aa8.31□□□□□ -1.08
CMTM1-210ENST00000528441 TMEM41AQ96HV5 264 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms