RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 MRPS2Q9Y399 296 aaKnown RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 WDR45Q9Y484 360 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 CEP192Q8TEP8 1941 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 TLCD2A6NGC4 264 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 M0R3H8 397 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 CHST10O43529 356 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 FGF17O60258 216 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 CTNSO60931 367 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 SEMA7AO75326 666 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 DBIP07108 87 aaKnown RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 CCNYL3P0C7X3 344 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 ACVR2AP27037 513 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 ALDH4A1P30038 563 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 GALNSP34059 522 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 C21orf59P57076 290 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 TAS2R41P59536 307 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 PIN1Q13526 163 aaPredicted RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 C14orf28Q4W4Y0 310 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 ENTPD8Q5MY95 495 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 PODNL1Q6PEZ8 512 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 FAM111BQ6SJ93 734 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 MAMSTRQ6ZN01 415 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 FRRS1Q6ZNA5 592 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 DGLUCYQ7Z3D6 616 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 ZNF438Q7Z4V0 828 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 LACC1Q8IV20 430 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 SFTPA2Q8IWL1 248 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 OR4N5Q8IXE1 308 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 SIX5Q8N196 739 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 C1orf216Q8TAB5 229 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 SLC7A13Q8TCU3 470 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 HOXB13Q92826 284 aaPredicted RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 ANKRD9Q96BM1 317 aaPredicted RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 SDF2Q99470 211 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 PELOQ9BRX2 385 aaKnown RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 COPS4Q9BT78 406 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 MIR1-1HGQ9H1L0 117 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 DUSP15Q9H1R2 295 aaPredicted RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 FAM60AQ9NP50 221 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 PDE7BQ9NP56 450 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 KRCC1Q9NPI7 259 aaPredicted RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 ZNF226Q9NYT6 803 aa13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 WARS2Q9UGM6 360 aaKnown RBP13.81□□□□□ -0.2
ECHDC1-220ENST00000528402 RHPN2P1A8MT19 583 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 DNAJB6O75190 326 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 CYP7B1O75881 506 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 OR5F1O95221 314 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 EPPINO95925 133 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 POU2F1P14859 743 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 IL9P15248 144 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 PCSK6P29122 969 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 MAP3K8P41279 467 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 AVPR1BP47901 424 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 PDX1P52945 283 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 OLR1P78380 273 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 TARDBPQ13148 414 aaKnown RBP eCLIP13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 SEC23BQ15437 767 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 TRMT12Q53H54 448 aaKnown RBP13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 UBE2UQ5VVX9 321 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 TYW3Q6IPR3 259 aaKnown RBP13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 CASP12Q6UXS9 341 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 PTCHD4Q6ZW05 846 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 RRM2BQ7LG56 351 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 ZNF761Q86XN6 746 aaPredicted RBP13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 RBM45Q8IUH3 476 aaKnown RBP13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 ZNF619Q8N2I2 560 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 CDS1Q92903 461 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 OTUB1Q96FW1 271 aaPredicted RBP13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 HSPA12BQ96MM6 686 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 CDX2Q99626 313 aaPredicted RBP13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 MAP3K3Q99759 626 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 ZNF350Q9GZX5 532 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 TBC1D17Q9HA65 648 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 ACOT13Q9NPJ3 140 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 MAT2BQ9NZL9 334 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 ZNF443Q9Y2A4 671 aaPredicted RBP13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 SLCO1B1Q9Y6L6 691 aa13.8□□□□□ -0.2
ECHDC1-220ENST00000528402 RANBP2P49792 3224 aaKnown RBP13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 FITM1A5D6W6 292 aa13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 ZNF860A6NHJ4 632 aa13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 AGAP5A6NIR3 686 aa13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 H0YIG0 161 aa13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 SGK494L7N484 410 aa13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 OR10H2O60403 315 aa13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 FMO6PO60774 539 aa13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 LDB3O75112 727 aa13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 RDH16O75452 317 aa13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 PIAS2O75928 621 aa13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 MT-ND2P03891 347 aa13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 CDK1P06493 297 aa13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 ACP2P11117 423 aa13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 PIPP12273 146 aaPredicted RBP13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 MLLT3P42568 568 aaPredicted RBP13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 AFF3P51826 1226 aaKnown RBP13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 PPP1CAP62136 330 aa13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 SNRPNP63162 240 aaKnown RBP13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 IGLV3-21P80748 117 aaPredicted RBP13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 MGAT2Q10469 447 aa13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 ZNHIT3Q15649 155 aaPredicted RBP13.79□□□□□ -0.2
ECHDC1-220ENST00000528402 TBCEQ15813 527 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms