RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	MASP1	P48740	699 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	CDK9	P50750	372 aa	Known RBP	10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	PSG6	Q00889	435 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	MPP2	Q14168	576 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	GALNTL6	Q49A17	601 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	TIGD3	Q6B0B8	471 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	SP5	Q6BEB4	398 aa	Predicted RBP	10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	ZNF551	Q7Z340	670 aa	Predicted RBP	10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	NUDCD3	Q8IVD9	361 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	SLC44A2	Q8IWA5	706 aa	Predicted RBP	10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	HOMEZ	Q8IX15	550 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	OR4N2	Q8NGD1	307 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	NEIL3	Q8TAT5	605 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	SDCCAG3	Q96C92	435 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	PPCDC	Q96CD2	204 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	ELP4	Q96EB1	424 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	PGM2	Q96G03	612 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	PPP3R2	Q96LZ3	170 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	COL21A1	Q96P44	957 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	OSBPL11	Q9BXB4	747 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	CENPH	Q9H3R5	247 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	REEP4	Q9H6H4	257 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	EXO5	Q9H790	373 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	DDX18	Q9NVP1	670 aa	Known RBP	10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	ACAD8	Q9UKU7	415 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	FAM215A	Q9Y5M1	114 aa		10.75	□□□□□ -0.69
PSMC3-205	ENST00000528362	WDR91	A4D1P6	747 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	C2orf72	A6NCS6	295 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	FIGNL2	A6NMB9	653 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	C19orf84	I3L1E1	186 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	GNB5	O14775	395 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	SNPH	O15079	494 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	TM9SF1	O15321	606 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	TSPAN2	O60636	221 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	TBX19	O60806	448 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	ABCB7	O75027	752 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	ICOSLG	O75144	302 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	SKAP2	O75563	359 aa	Predicted RBP	10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	LYPLA1	O75608	230 aa	Predicted RBP	10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	REM1	O75628	298 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	CLDN14	O95500	239 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	SERPINE1	P05121	402 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	HPN	P05981	417 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	IFI6	P09912	130 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	ELAVL4	P26378	380 aa	Known RBP	10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	PTPN6	P29350	595 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	FRK	P42685	505 aa	Predicted RBP	10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	NUP107	P57740	925 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	PSPH	P78330	225 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	HSPB3	Q12988	150 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	SNTA1	Q13424	505 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	CHI3L2	Q15782	390 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	WLS	Q5T9L3	541 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	RTL6	Q6ICC9	239 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	TMEM211	Q6ICI0	200 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	SLC30A6	Q6NXT4	461 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	ZNF585A	Q6P3V2	769 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	MYO7B	Q6PIF6	2116 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	ANGPTL8	Q6UXH0	198 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	LRIG3	Q6UXM1	1119 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	LARP4	Q71RC2	724 aa	Known RBP eCLIP	10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	WDR53	Q7Z5U6	358 aa	Predicted RBP	10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	RNF138	Q8WVD3	245 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	RND1	Q92730	232 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	SARAF	Q96BY9	339 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	ADO	Q96SZ5	270 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	KLRF1	Q9NZS2	232 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	ACTL7B	Q9Y614	415 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	FBN2	P35556	2912 aa		10.74	□□□□□ -0.69
PSMC3-205	ENST00000528362	C15orf38-AP3S2	A0A0A6YYH1	394 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	BIRC5	O15392	142 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	HNRNPR	O43390	633 aa	Known RBP	10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	WDR1	O75083	606 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	TRAPPC6A	O75865	159 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	HSPA4L	O95757	839 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	PRF1	P14222	555 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	IL12B	P29460	328 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	ASMT	P46597	345 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	CRYZ	Q08257	329 aa	Known RBP	10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	PMPCA	Q10713	525 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	EFR3A	Q14156	821 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	CYP27C1	Q4G0S4	372 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	ATP6AP1L	Q52LC2	224 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	C6orf136	Q5SQH8	315 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	B3GNT6	Q6ZMB0	384 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	CCDC71	Q8IV32	467 aa	Predicted RBP	10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	LIX1	Q8N485	282 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	WDSUB1	Q8N9V3	476 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	OR1J4	Q8NGS1	313 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	PPP1R14C	Q8TAE6	165 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	MARVELD3	Q96A59	401 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	EFHD2	Q96C19	240 aa	Predicted RBP	10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	TMCO6	Q96DC7	493 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	ZBED6CL	Q96FA7	236 aa	Predicted RBP	10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	TTYH2	Q9BSA4	534 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	LMF2	Q9BU23	707 aa	Known RBP	10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	C1orf50	Q9BV19	199 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	C20orf27	Q9GZN8	174 aa		10.73	□□□□□ -0.69
PSMC3-205	ENST00000528362	CHST11	Q9NPF2	352 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms