RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 SH3GL2Q99962 352 aa13.81□□□□□ -0.2
EXOSC4-203ENST00000527954 C12orf65Q9H3J6 166 aaKnown RBP13.81□□□□□ -0.2
EXOSC4-203ENST00000527954 FOLH1BQ9HBA9 442 aa13.81□□□□□ -0.2
EXOSC4-203ENST00000527954 SIRT5Q9NXA8 310 aa13.81□□□□□ -0.2
EXOSC4-203ENST00000527954 DNAJB12Q9NXW2 375 aaKnown RBP13.81□□□□□ -0.2
EXOSC4-203ENST00000527954 CRIM1Q9NZV1 1036 aa13.81□□□□□ -0.2
EXOSC4-203ENST00000527954 SENP1Q9P0U3 644 aa13.81□□□□□ -0.2
EXOSC4-203ENST00000527954 ZNF629Q9UEG4 869 aaPredicted RBP13.81□□□□□ -0.2
EXOSC4-203ENST00000527954 MBD3L4A6NDZ8 208 aaPredicted RBP13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 MBD3L3A6NE82 208 aaPredicted RBP13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 MBD3L5A6NJ08 208 aaPredicted RBP13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 MYO1GB0I1T2 1018 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 PLOD3O60568 738 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 TSPAN2O60636 221 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 ABCB7O75027 752 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 PROCP04070 461 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 CYP4B1P13584 511 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 DDCP20711 480 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 IL12BP29460 328 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 GCKP35557 465 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 KRT20P35900 424 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 SLCO1A2P46721 670 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 SRYQ05066 204 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 ZNF763Q0D2J5 394 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 RCAN2Q14206 197 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 OR5M10Q6IEU7 315 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 SH2D5Q6ZV89 423 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 PLCZ1Q86YW0 608 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 SLC44A2Q8IWA5 706 aaPredicted RBP13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 TRIM42Q8IWZ5 723 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 C9orf106Q8NAJ2 232 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 OR4N2Q8NGD1 307 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 MBD3L2Q8NHZ7 208 aaPredicted RBP13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 ZPLD1Q8TCW7 415 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 UBLCP1Q8WVY7 318 aaPredicted RBP13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 RNASE6Q93091 150 aaKnown RBP13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 EFHD2Q96C19 240 aaPredicted RBP13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 LRRC46Q96FV0 321 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 TUBA1CQ9BQE3 449 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 SHCBP1LQ9BZQ2 653 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 OR2B2Q9GZK3 357 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 CALHM2Q9HA72 323 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 TAS2R9Q9NYW1 312 aa13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 POLR3HQ9Y535 204 aaPredicted RBP13.8□□□□□ -0.2
EXOSC4-203ENST00000527954 INTS1Q8N201 2190 aaKnown RBP13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 SMIM23A6NLE4 172 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 PLIN3O60664 434 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 CRCPO75575 148 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 CTAG2O75638 210 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 JUNP05412 331 aaKnown RBP13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 CPN1P15169 458 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 CTSSP25774 331 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 DNAJA1P31689 397 aaKnown RBP13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 GSTM5P46439 218 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 CCT5P48643 541 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 STARP49675 285 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 NCBP2P52298 156 aaKnown RBP eCLIP13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 PNLIPRP2P54317 469 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 EFR3AQ14156 821 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 FBXL19-AS1Q494R0 122 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 CFAP157Q5JU67 520 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 FAM71E1Q6IPT2 247 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 SPNS3Q6ZMD2 512 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 FRMD7Q6ZUT3 714 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 CNPY4Q8N129 248 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 GPATCH1Q9BRR8 931 aaKnown RBP13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 POLDIP3Q9BY77 421 aaKnown RBP13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 TNFRSF12AQ9NP84 129 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 MIEF1Q9NQG6 463 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 TAS2R10Q9NYW0 307 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 FBXL2Q9UKC9 423 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 GRID1Q9ULK0 1009 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 OR10H1Q9Y4A9 318 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 WIF1Q9Y5W5 379 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 EXPH5Q8NEV8 1989 aa13.79□□□□□ -0.2
EXOSC4-203ENST00000527954 CELSR1Q9NYQ6 3014 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 C17orf51A8MQB3 221 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 H0Y3Z8 333 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 CPA3P15088 417 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 TCEA1P23193 301 aaKnown RBP13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 SRD5A2P31213 254 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 CRHR1P34998 444 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 PEX19P40855 299 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 MC3RP41968 323 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 DGKQP52824 942 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 ART1P52961 327 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 GFRA1P56159 465 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 DNAJB13P59910 316 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 ZNF155Q12901 538 aaPredicted RBP13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 CCDC153Q494R4 210 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 FLYWCH1Q4VC44 716 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 SH2D4BQ5SQS7 431 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 NOXRED1Q6NXP6 359 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 ENPP6Q6UWR7 440 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 TMEM107Q6UX40 140 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 PLXDC2Q6UX71 529 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 TRIM46Q7Z4K8 759 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 IFNEQ86WN2 208 aa13.78□□□□□ -0.2
EXOSC4-203ENST00000527954 CCDC63Q8NA47 563 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms