RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 FOXO1Q12778 655 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 MAD2L1Q13257 205 aaPredicted RBP8.47□□□□□ -1.05
LINC00958-203ENST00000527945 RNFT1Q5M7Z0 435 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 ATG16L1Q676U5 607 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 OGFOD2Q6N063 350 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 TMEM107Q6UX40 140 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 FAM47EQ6ZV65 393 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 NUP54Q7Z3B4 507 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 WDR53Q7Z5U6 358 aaPredicted RBP8.47□□□□□ -1.05
LINC00958-203ENST00000527945 FAM109AQ8N4B1 249 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 PHF10Q8WUB8 498 aaKnown RBP8.47□□□□□ -1.05
LINC00958-203ENST00000527945 NTNG2Q96CW9 530 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 GIMAP5Q96F15 307 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 BTBD9Q96Q07 612 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 BBS4Q96RK4 519 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 GAL3ST4Q96RP7 486 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 NXF5Q9H1B4 397 aaKnown RBP8.47□□□□□ -1.05
LINC00958-203ENST00000527945 HHATLQ9HCP6 504 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 ZFP64Q9NPA5 681 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 ACKR4Q9NPB9 350 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 ACSS1Q9NUB1 689 aaPredicted RBP8.47□□□□□ -1.05
LINC00958-203ENST00000527945 INTS9Q9NV88 658 aaKnown RBP8.47□□□□□ -1.05
LINC00958-203ENST00000527945 AIG1Q9NVV5 245 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 B4GALT7Q9UBV7 327 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 NPIPA1Q9UND3 350 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 GPR55Q9Y2T6 319 aaPredicted RBP8.47□□□□□ -1.05
LINC00958-203ENST00000527945 USH1CQ9Y6N9 552 aa8.47□□□□□ -1.05
LINC00958-203ENST00000527945 OR6C70A6NIJ9 312 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 E9PLN8 166 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 HCN1O60741 890 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 PPM1BO75688 479 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 ABCB1P08183 1280 aaPredicted RBP8.46□□□□□ -1.06
LINC00958-203ENST00000527945 CT45A8P0DMV1 189 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 CT45A9P0DMV2 189 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 CCL3P10147 92 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 PRPS2P11908 318 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 ELAVL4P26378 380 aaKnown RBP8.46□□□□□ -1.06
LINC00958-203ENST00000527945 ABCD3P28288 659 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 PTGS2P35354 604 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 MAP3K8P41279 467 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 NCBP2P52298 156 aaKnown RBP eCLIP8.46□□□□□ -1.06
LINC00958-203ENST00000527945 NME5P56597 212 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 CLDN8P56748 225 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 UFM1P61960 85 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 PPIAP62937 165 aaKnown RBP8.46□□□□□ -1.06
LINC00958-203ENST00000527945 PLGLB1Q02325 96 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 HSPB3Q12988 150 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 SLC10A1Q14973 349 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 MLC1Q15049 377 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 CT45A2Q5DJT8 189 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 CMPK2Q5EBM0 449 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 EXOSC6Q5RKV6 272 aaKnown RBP8.46□□□□□ -1.06
LINC00958-203ENST00000527945 SLC30A6Q6NXT4 461 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 XKRXQ6PP77 449 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 EPGNQ6UW88 154 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 MAMDC2Q7Z304 686 aaPredicted RBP8.46□□□□□ -1.06
LINC00958-203ENST00000527945 CAMKMTQ7Z624 323 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 PACS2Q86VP3 889 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 PRR22Q8IZ63 422 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 CLECL1Q8IZS7 167 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 OR2L13Q8N349 312 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 OR4N2Q8NGD1 307 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 RFWD2Q8NHY2 731 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 ZFP28Q8NHY6 868 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 PIWIL2Q8TC59 973 aaKnown RBP8.46□□□□□ -1.06
LINC00958-203ENST00000527945 SPPL2AQ8TCT8 520 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 LRRC8CQ8TDW0 803 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 HOXB13Q92826 284 aaPredicted RBP8.46□□□□□ -1.06
LINC00958-203ENST00000527945 PPCDCQ96CD2 204 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 COQ8BQ96D53 544 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 ELP4Q96EB1 424 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 ZBED6CLQ96FA7 236 aaPredicted RBP8.46□□□□□ -1.06
LINC00958-203ENST00000527945 THOC1Q96FV9 657 aaKnown RBP8.46□□□□□ -1.06
LINC00958-203ENST00000527945 MAGEB18Q96M61 343 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 VSTM2LQ96N03 204 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 PRPF18Q99633 342 aaKnown RBP8.46□□□□□ -1.06
LINC00958-203ENST00000527945 VKORC1Q9BQB6 163 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 ANGPTL4Q9BY76 406 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 TTTY12Q9BZ98 90 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 OCEL1Q9H607 264 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 NOP53Q9NZM5 478 aaKnown RBP8.46□□□□□ -1.06
LINC00958-203ENST00000527945 NTMQ9P121 344 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 BCAP29Q9UHQ4 241 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 MRTO4Q9UKD2 239 aaKnown RBP8.46□□□□□ -1.06
LINC00958-203ENST00000527945 CNOT11Q9UKZ1 510 aaKnown RBP8.46□□□□□ -1.06
LINC00958-203ENST00000527945 C19orf53Q9UNZ5 99 aaPredicted RBP8.46□□□□□ -1.06
LINC00958-203ENST00000527945 GPR45Q9Y5Y3 372 aa8.46□□□□□ -1.06
LINC00958-203ENST00000527945 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.46□□□□□ -1.06
LINC00958-203ENST00000527945 TRGV8A0A0C4DH27 118 aa8.45□□□□□ -1.06
LINC00958-203ENST00000527945 C17orf51A8MQB3 221 aa8.45□□□□□ -1.06
LINC00958-203ENST00000527945 G3V3Y1 287 aa8.45□□□□□ -1.06
LINC00958-203ENST00000527945 CCL21O00585 134 aa8.45□□□□□ -1.06
LINC00958-203ENST00000527945 BCKDKO14874 412 aa8.45□□□□□ -1.06
LINC00958-203ENST00000527945 PDPK1O15530 556 aa8.45□□□□□ -1.06
LINC00958-203ENST00000527945 ZNHIT1O43257 154 aa8.45□□□□□ -1.06
LINC00958-203ENST00000527945 HS6ST1O60243 411 aa8.45□□□□□ -1.06
LINC00958-203ENST00000527945 EDF1O60869 148 aaKnown RBP8.45□□□□□ -1.06
LINC00958-203ENST00000527945 TRIM3O75382 744 aaPredicted RBP8.45□□□□□ -1.06
LINC00958-203ENST00000527945 CLDN1O95832 211 aa8.45□□□□□ -1.06
LINC00958-203ENST00000527945 ABOP16442 354 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms