RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PTGDSP41222 190 aa30.21■■■□□ 2.43
SSSCA1-205ENST00000527920 MC3RP41968 323 aa30.21■■■□□ 2.43
SSSCA1-205ENST00000527920 RFTN2Q52LD8 501 aaPredicted RBP30.21■■■□□ 2.43
SSSCA1-205ENST00000527920 SH2D4BQ5SQS7 431 aa30.21■■■□□ 2.43
SSSCA1-205ENST00000527920 ZNF585AQ6P3V2 769 aa30.21■■■□□ 2.43
SSSCA1-205ENST00000527920 NPSR1Q6W5P4 371 aa30.21■■■□□ 2.43
SSSCA1-205ENST00000527920 B3GNT6Q6ZMB0 384 aa30.21■■■□□ 2.43
SSSCA1-205ENST00000527920 ZCCHC23Q6ZST2 131 aa30.21■■■□□ 2.43
SSSCA1-205ENST00000527920 GNRHR2Q96P88 292 aa30.21■■■□□ 2.43
SSSCA1-205ENST00000527920 TNFRSF10DQ9UBN6 386 aa30.21■■■□□ 2.43
SSSCA1-205ENST00000527920 FAM215AQ9Y5M1 114 aa30.21■■■□□ 2.43
SSSCA1-205ENST00000527920 TMEM233B4DJY2 109 aa30.2■■■□□ 2.43
SSSCA1-205ENST00000527920 SNPHO15079 494 aa30.2■■■□□ 2.43
SSSCA1-205ENST00000527920 TSPAN2O60636 221 aa30.2■■■□□ 2.43
SSSCA1-205ENST00000527920 ICOSLGO75144 302 aa30.2■■■□□ 2.43
SSSCA1-205ENST00000527920 RPL38P63173 70 aaKnown RBP30.2■■■□□ 2.43
SSSCA1-205ENST00000527920 PMPCAQ10713 525 aa30.2■■■□□ 2.43
SSSCA1-205ENST00000527920 EFR3AQ14156 821 aa30.2■■■□□ 2.43
SSSCA1-205ENST00000527920 XKR7Q5GH72 579 aa30.2■■■□□ 2.43
SSSCA1-205ENST00000527920 DDIASQ8IXT1 998 aa30.2■■■□□ 2.43
SSSCA1-205ENST00000527920 OR1J4Q8NGS1 313 aa30.2■■■□□ 2.43
SSSCA1-205ENST00000527920 TTYH2Q9BSA4 534 aa30.2■■■□□ 2.43
SSSCA1-205ENST00000527920 REEP4Q9H6H4 257 aa30.2■■■□□ 2.43
SSSCA1-205ENST00000527920 DDX18Q9NVP1 670 aaKnown RBP30.2■■■□□ 2.43
SSSCA1-205ENST00000527920 KLRF1Q9NZS2 232 aa30.2■■■□□ 2.43
SSSCA1-205ENST00000527920 RNF6Q9Y252 685 aa30.2■■■□□ 2.43
SSSCA1-205ENST00000527920 PIP5K1BO14986 540 aa30.19■■■□□ 2.42
SSSCA1-205ENST00000527920 CTIFO43310 598 aaKnown RBP30.19■■■□□ 2.42
SSSCA1-205ENST00000527920 REM1O75628 298 aa30.19■■■□□ 2.42
SSSCA1-205ENST00000527920 PTPN6P29350 595 aa30.19■■■□□ 2.42
SSSCA1-205ENST00000527920 KRT20P35900 424 aa30.19■■■□□ 2.42
SSSCA1-205ENST00000527920 ASMTP46597 345 aa30.19■■■□□ 2.42
SSSCA1-205ENST00000527920 NUP107P57740 925 aa30.19■■■□□ 2.42
SSSCA1-205ENST00000527920 PSG6Q00889 435 aa30.19■■■□□ 2.42
SSSCA1-205ENST00000527920 PDE7AQ13946 482 aa30.19■■■□□ 2.42
SSSCA1-205ENST00000527920 DESI1Q6ICB0 168 aa30.19■■■□□ 2.42
SSSCA1-205ENST00000527920 TMEM107Q6UX40 140 aa30.19■■■□□ 2.42
SSSCA1-205ENST00000527920 LILRB4Q8NHJ6 448 aa30.19■■■□□ 2.42
SSSCA1-205ENST00000527920 RNF138Q8WVD3 245 aa30.19■■■□□ 2.42
SSSCA1-205ENST00000527920 ELP4Q96EB1 424 aa30.19■■■□□ 2.42
SSSCA1-205ENST00000527920 PPP3R2Q96LZ3 170 aa30.19■■■□□ 2.42
SSSCA1-205ENST00000527920 UPK1AO00322 258 aa30.18■■■□□ 2.42
SSSCA1-205ENST00000527920 ARRB2P32121 409 aa30.18■■■□□ 2.42
SSSCA1-205ENST00000527920 PNLIPRP2P54317 469 aa30.18■■■□□ 2.42
SSSCA1-205ENST00000527920 MRPS22P82650 360 aaKnown RBP30.18■■■□□ 2.42
SSSCA1-205ENST00000527920 ZNF155Q12901 538 aaPredicted RBP30.18■■■□□ 2.42
SSSCA1-205ENST00000527920 CYP27C1Q4G0S4 372 aa30.18■■■□□ 2.42
SSSCA1-205ENST00000527920 NHSL2Q5HYW2 709 aa30.18■■■□□ 2.42
SSSCA1-205ENST00000527920 C1orf185Q5T7R7 199 aa30.18■■■□□ 2.42
SSSCA1-205ENST00000527920 RTL6Q6ICC9 239 aa30.18■■■□□ 2.42
SSSCA1-205ENST00000527920 ANGPTL8Q6UXH0 198 aa30.18■■■□□ 2.42
SSSCA1-205ENST00000527920 CROCCP2Q86T23 111 aa30.18■■■□□ 2.42
SSSCA1-205ENST00000527920 SLC44A2Q8IWA5 706 aaPredicted RBP30.18■■■□□ 2.42
SSSCA1-205ENST00000527920 ACBD4Q8NC06 268 aa30.18■■■□□ 2.42
SSSCA1-205ENST00000527920 MTERF3Q96E29 417 aa30.18■■■□□ 2.42
SSSCA1-205ENST00000527920 PKDREJQ9NTG1 2253 aa30.17■■■□□ 2.42
SSSCA1-205ENST00000527920 PHF3Q92576 2039 aaKnown RBP30.17■■■□□ 2.42
SSSCA1-205ENST00000527920 FAM47E-STBD1D6RA91 191 aa30.17■■■□□ 2.42
SSSCA1-205ENST00000527920 PDPK1O15530 556 aa30.17■■■□□ 2.42
SSSCA1-205ENST00000527920 NME6O75414 186 aaPredicted RBP30.17■■■□□ 2.42
SSSCA1-205ENST00000527920 TRAPPC6AO75865 159 aa30.17■■■□□ 2.42
SSSCA1-205ENST00000527920 COX6B1P14854 86 aa30.17■■■□□ 2.42
SSSCA1-205ENST00000527920 TRPC1P48995 793 aa30.17■■■□□ 2.42
SSSCA1-205ENST00000527920 CRYZQ08257 329 aaKnown RBP30.17■■■□□ 2.42
SSSCA1-205ENST00000527920 LARP4Q71RC2 724 aaKnown RBP eCLIP30.17■■■□□ 2.42
SSSCA1-205ENST00000527920 PPCDCQ96CD2 204 aa30.17■■■□□ 2.42
SSSCA1-205ENST00000527920 TSSK3Q96PN8 268 aa30.17■■■□□ 2.42
SSSCA1-205ENST00000527920 ADOQ96SZ5 270 aa30.17■■■□□ 2.42
SSSCA1-205ENST00000527920 GALNT9Q9HCQ5 603 aa30.17■■■□□ 2.42
SSSCA1-205ENST00000527920 OR10H1Q9Y4A9 318 aa30.17■■■□□ 2.42
SSSCA1-205ENST00000527920 NCKAP5O14513 1909 aa30.16■■■□□ 2.42
SSSCA1-205ENST00000527920 TTC36A6NLP5 189 aa30.16■■■□□ 2.42
SSSCA1-205ENST00000527920 TMEM114B3SHH9 223 aa30.16■■■□□ 2.42
SSSCA1-205ENST00000527920 GNB5O14775 395 aa30.16■■■□□ 2.42
SSSCA1-205ENST00000527920 GLI4P10075 376 aa30.16■■■□□ 2.42
SSSCA1-205ENST00000527920 BCKDHAP12694 445 aa30.16■■■□□ 2.42
SSSCA1-205ENST00000527920 MAPK1P28482 360 aa30.16■■■□□ 2.42
SSSCA1-205ENST00000527920 IL12BP29460 328 aa30.16■■■□□ 2.42
SSSCA1-205ENST00000527920 FRKP42685 505 aaPredicted RBP30.16■■■□□ 2.42
SSSCA1-205ENST00000527920 SERPINB4P48594 390 aa30.16■■■□□ 2.42
SSSCA1-205ENST00000527920 GALNTL6Q49A17 601 aa30.16■■■□□ 2.42
SSSCA1-205ENST00000527920 TNFAIP8L3Q5GJ75 292 aa30.16■■■□□ 2.42
SSSCA1-205ENST00000527920 ZFP28Q8NHY6 868 aa30.16■■■□□ 2.42
SSSCA1-205ENST00000527920 GFM2Q969S9 779 aaKnown RBP30.16■■■□□ 2.42
SSSCA1-205ENST00000527920 ZBED6CLQ96FA7 236 aaPredicted RBP30.16■■■□□ 2.42
SSSCA1-205ENST00000527920 ACTL7BQ9Y614 415 aa30.16■■■□□ 2.42
SSSCA1-205ENST00000527920 ADGRG4Q8IZF6 3080 aa30.15■■■□□ 2.42
SSSCA1-205ENST00000527920 C15orf38-AP3S2A0A0A6YYH1 394 aa30.15■■■□□ 2.42
SSSCA1-205ENST00000527920 C19orf84I3L1E1 186 aa30.15■■■□□ 2.42
SSSCA1-205ENST00000527920 TM9SF1O15321 606 aa30.15■■■□□ 2.42
SSSCA1-205ENST00000527920 DDX5P17844 614 aaKnown RBP30.15■■■□□ 2.42
SSSCA1-205ENST00000527920 VASNQ6EMK4 673 aa30.15■■■□□ 2.42
SSSCA1-205ENST00000527920 EXOC3L1Q86VI1 746 aa30.15■■■□□ 2.42
SSSCA1-205ENST00000527920 NUDCD3Q8IVD9 361 aa30.15■■■□□ 2.42
SSSCA1-205ENST00000527920 PM20D2Q8IYS1 436 aa30.15■■■□□ 2.42
SSSCA1-205ENST00000527920 ULK2Q8IYT8 1036 aa30.15■■■□□ 2.42
SSSCA1-205ENST00000527920 DTNBP1Q96EV8 351 aa30.15■■■□□ 2.42
SSSCA1-205ENST00000527920 SPOCK3Q9BQ16 436 aa30.15■■■□□ 2.42
SSSCA1-205ENST00000527920 ACSS1Q9NUB1 689 aaPredicted RBP30.15■■■□□ 2.42
SSSCA1-205ENST00000527920 BIRC5O15392 142 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms