RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 ASB18Q6ZVZ8 466 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 OLIG3Q7RTU3 272 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 SNX32Q86XE0 403 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 SLC44A2Q8IWA5 706 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-205ENST00000527046 PRR22Q8IZ63 422 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 SLC15A4Q8N697 577 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 HORMAD2Q8N7B1 307 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 POU5F2Q8N7G0 328 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 BCORP1Q8N888 145 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 VPS37AQ8NEZ2 397 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 OR5D16Q8NGK9 328 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 PIK3R3Q92569 461 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 HSPBAP1Q96EW2 488 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 SCMH1Q96GD3 660 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 ITCHQ96J02 903 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 MS4A4EQ96PG1 132 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 OR7D2Q96RA2 312 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 GAL3ST4Q96RP7 486 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 SLC35A5Q9BS91 424 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 ACTRT3Q9BYD9 372 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 RTN4RQ9BZR6 473 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 TRIM8Q9BZR9 551 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 SLC25A18Q9H1K4 315 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 PIGUQ9H490 435 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 TPT1P8Q9HAU6 139 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 EQTNQ9NQ60 294 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 DEPPQ9NTK1 212 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 ARL8BQ9NVJ2 186 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.92□□□□□ -0.82
NEDD8-205ENST00000527046 FLRT3Q9NZU0 649 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 RALYQ9UKM9 306 aaKnown RBP9.92□□□□□ -0.82
NEDD8-205ENST00000527046 CFL2Q9Y281 166 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 HRH3Q9Y5N1 445 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 PCNX3Q9H6A9 2034 aa9.92□□□□□ -0.82
NEDD8-205ENST00000527046 RNF103-CHMP3A0A140T963 221 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 PINLYPA6NC86 204 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 OR5H15A6NDH6 313 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 HMGN4O00479 90 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 CDK2AP1O14519 115 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 COQ9O75208 318 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 UGT2B11O75310 529 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 T-ENOLP0DO92 83 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 COX4I1P13073 169 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 NAGAP17050 411 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 MATN1P21941 496 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 PIGAP37287 484 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 SSR4P51571 173 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 FBXW4P57775 412 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 PRR5P85299 388 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 LRRC74AQ0VAA2 488 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 TP53BP2Q13625 1128 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 SOWAHCQ53LP3 525 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-205ENST00000527046 COLEC12Q5KU26 742 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 IL20RBQ6UXL0 311 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 APOOLQ6UXV4 268 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 RNF130Q86XS8 419 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 CDRT4Q8N9R6 151 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 OR56A1Q8NGH5 318 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 FBXO27Q8NI29 283 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 RP9Q8TA86 221 aaKnown RBP9.91□□□□□ -0.82
NEDD8-205ENST00000527046 C9orf43Q8TAL5 461 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-205ENST00000527046 FBXO30Q8TB52 745 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 SLC39A7Q92504 469 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 CDS1Q92903 461 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 TMBIM1Q969X1 311 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 MOAP1Q96BY2 351 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 OMA1Q96E52 524 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 NODALQ96S42 347 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 STACQ99469 402 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 GPATCH1Q9BRR8 931 aaKnown RBP9.91□□□□□ -0.82
NEDD8-205ENST00000527046 OR51I1Q9H343 314 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 RMND5AQ9H871 391 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 KCNE5Q9UJ90 142 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 LEF1Q9UJU2 399 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-205ENST00000527046 CNOT11Q9UKZ1 510 aaKnown RBP9.91□□□□□ -0.82
NEDD8-205ENST00000527046 VPS4AQ9UN37 437 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 PCDHGB4Q9UN71 923 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 ZNF451Q9Y4E5 1061 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 CHCHD2Q9Y6H1 151 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-205ENST00000527046 CAPN7Q9Y6W3 813 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 ATRXP46100 2492 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 NINQ8N4C6 2090 aa9.91□□□□□ -0.82
NEDD8-205ENST00000527046 A8MVJ9 347 aa9.9□□□□□ -0.82
NEDD8-205ENST00000527046 CLIC1O00299 241 aa9.9□□□□□ -0.82
NEDD8-205ENST00000527046 ACOX3O15254 700 aa9.9□□□□□ -0.82
NEDD8-205ENST00000527046 TNFRSF21O75509 655 aa9.9□□□□□ -0.82
NEDD8-205ENST00000527046 PPM1BO75688 479 aa9.9□□□□□ -0.82
NEDD8-205ENST00000527046 KCNK2O95069 426 aa9.9□□□□□ -0.82
NEDD8-205ENST00000527046 SP1P08047 785 aa9.9□□□□□ -0.82
NEDD8-205ENST00000527046 NUDT7P0C024 238 aa9.9□□□□□ -0.82
NEDD8-205ENST00000527046 OR12D1P0DN82 309 aa9.9□□□□□ -0.82
NEDD8-205ENST00000527046 CCL3P10147 92 aa9.9□□□□□ -0.82
NEDD8-205ENST00000527046 BMP2P12643 396 aa9.9□□□□□ -0.82
NEDD8-205ENST00000527046 GPX2P18283 190 aa9.9□□□□□ -0.82
NEDD8-205ENST00000527046 CYB561P49447 251 aa9.9□□□□□ -0.82
NEDD8-205ENST00000527046 PRIM2P49643 509 aa9.9□□□□□ -0.82
NEDD8-205ENST00000527046 GAS1P54826 345 aa9.9□□□□□ -0.82
NEDD8-205ENST00000527046 MRPS22P82650 360 aaKnown RBP9.9□□□□□ -0.82
NEDD8-205ENST00000527046 CYLC2Q14093 348 aaPredicted RBP9.9□□□□□ -0.82
NEDD8-205ENST00000527046 RGNQ15493 299 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms