RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 SNX32Q86XE0 403 aa17.28■□□□□ 0.36
PTPRK-218ENST00000525459 GOLM1Q8NBJ4 401 aa17.28■□□□□ 0.36
PTPRK-218ENST00000525459 ADAMTS15Q8TE58 950 aa17.28■□□□□ 0.36
PTPRK-218ENST00000525459 JADE3Q92613 823 aa17.28■□□□□ 0.36
PTPRK-218ENST00000525459 SPACA9Q96E40 222 aaPredicted RBP17.28■□□□□ 0.36
PTPRK-218ENST00000525459 SGCZQ96LD1 299 aa17.28■□□□□ 0.36
PTPRK-218ENST00000525459 SLC25A18Q9H1K4 315 aa17.28■□□□□ 0.36
PTPRK-218ENST00000525459 PIGUQ9H490 435 aa17.28■□□□□ 0.36
PTPRK-218ENST00000525459 ERVK-11Q9UQG0 969 aa17.28■□□□□ 0.36
PTPRK-218ENST00000525459 NPFFR2Q9Y5X5 522 aa17.28■□□□□ 0.36
PTPRK-218ENST00000525459 WDPCPO95876 746 aa17.27■□□□□ 0.36
PTPRK-218ENST00000525459 AK1P00568 194 aa17.27■□□□□ 0.36
PTPRK-218ENST00000525459 FBXO45P0C2W1 286 aa17.27■□□□□ 0.36
PTPRK-218ENST00000525459 ABCD3P28288 659 aa17.27■□□□□ 0.36
PTPRK-218ENST00000525459 CORO7P57737 925 aa17.27■□□□□ 0.36
PTPRK-218ENST00000525459 RPP38P78345 283 aaKnown RBP17.27■□□□□ 0.36
PTPRK-218ENST00000525459 OC90Q02509 493 aaPredicted RBP17.27■□□□□ 0.36
PTPRK-218ENST00000525459 TUBA3CQ13748 450 aa17.27■□□□□ 0.36
PTPRK-218ENST00000525459 PAGE3Q5JUK9 113 aa17.27■□□□□ 0.36
PTPRK-218ENST00000525459 TUBA3EQ6PEY2 450 aa17.27■□□□□ 0.36
PTPRK-218ENST00000525459 ANGPTL8Q6UXH0 198 aa17.27■□□□□ 0.36
PTPRK-218ENST00000525459 DHDDSQ86SQ9 333 aa17.27■□□□□ 0.36
PTPRK-218ENST00000525459 SLC44A2Q8IWA5 706 aaPredicted RBP17.27■□□□□ 0.36
PTPRK-218ENST00000525459 CYP4Z2PQ8N1L4 340 aa17.27■□□□□ 0.36
PTPRK-218ENST00000525459 ZFP90Q8TF47 636 aa17.27■□□□□ 0.36
PTPRK-218ENST00000525459 SLC9A6Q92581 669 aa17.27■□□□□ 0.36
PTPRK-218ENST00000525459 THUMPD1Q9NXG2 353 aaKnown RBP17.27■□□□□ 0.36
PTPRK-218ENST00000525459 PCDHGB6Q9Y5F9 930 aa17.27■□□□□ 0.36
PTPRK-218ENST00000525459 MAN1A2O60476 641 aa17.27■□□□□ 0.35
PTPRK-218ENST00000525459 GSNP06396 782 aa17.27■□□□□ 0.35
PTPRK-218ENST00000525459 HOXB9P17482 250 aaPredicted RBP17.27■□□□□ 0.35
PTPRK-218ENST00000525459 MATN1P21941 496 aa17.27■□□□□ 0.35
PTPRK-218ENST00000525459 SOX3P41225 446 aa17.27■□□□□ 0.35
PTPRK-218ENST00000525459 FADDQ13158 208 aa17.27■□□□□ 0.35
PTPRK-218ENST00000525459 NFYCQ13952 458 aa17.27■□□□□ 0.35
PTPRK-218ENST00000525459 DECR1Q16698 335 aa17.27■□□□□ 0.35
PTPRK-218ENST00000525459 TRMT5Q32P41 509 aaKnown RBP17.27■□□□□ 0.35
PTPRK-218ENST00000525459 NPSR1Q6W5P4 371 aa17.27■□□□□ 0.35
PTPRK-218ENST00000525459 COX18Q8N8Q8 333 aa17.27■□□□□ 0.35
PTPRK-218ENST00000525459 GPR151Q8TDV0 419 aa17.27■□□□□ 0.35
PTPRK-218ENST00000525459 TMEM125Q96AQ2 219 aa17.27■□□□□ 0.35
PTPRK-218ENST00000525459 SECISBP2Q96T21 854 aaKnown RBP17.27■□□□□ 0.35
PTPRK-218ENST00000525459 LIN28AQ9H9Z2 209 aaKnown RBP17.27■□□□□ 0.35
PTPRK-218ENST00000525459 TPT1P8Q9HAU6 139 aa17.27■□□□□ 0.35
PTPRK-218ENST00000525459 LRFN1Q9P244 771 aa17.27■□□□□ 0.35
PTPRK-218ENST00000525459 CBLCQ9ULV8 474 aa17.27■□□□□ 0.35
PTPRK-218ENST00000525459 PCDHB14Q9Y5E9 798 aa17.27■□□□□ 0.35
PTPRK-218ENST00000525459 TRAV17A0A0B4J275 112 aa17.26■□□□□ 0.35
PTPRK-218ENST00000525459 TP53I11O14683 189 aa17.26■□□□□ 0.35
PTPRK-218ENST00000525459 MRASO14807 208 aa17.26■□□□□ 0.35
PTPRK-218ENST00000525459 ATXN7O15265 892 aaPredicted RBP17.26■□□□□ 0.35
PTPRK-218ENST00000525459 PPM1BO75688 479 aa17.26■□□□□ 0.35
PTPRK-218ENST00000525459 ACP2P11117 423 aa17.26■□□□□ 0.35
PTPRK-218ENST00000525459 COX4I1P13073 169 aa17.26■□□□□ 0.35
PTPRK-218ENST00000525459 PIGAP37287 484 aa17.26■□□□□ 0.35
PTPRK-218ENST00000525459 TNFSF10P50591 281 aa17.26■□□□□ 0.35
PTPRK-218ENST00000525459 NNATQ16517 81 aa17.26■□□□□ 0.35
PTPRK-218ENST00000525459 NTRK2Q16620 822 aa17.26■□□□□ 0.35
PTPRK-218ENST00000525459 REP15Q6BDI9 236 aa17.26■□□□□ 0.35
PTPRK-218ENST00000525459 RTL4Q6ZR62 310 aa17.26■□□□□ 0.35
PTPRK-218ENST00000525459 SLC16A11Q8NCK7 471 aa17.26■□□□□ 0.35
PTPRK-218ENST00000525459 BTBD2Q9BX70 525 aa17.26■□□□□ 0.35
PTPRK-218ENST00000525459 EXD2Q9NVH0 621 aa17.26■□□□□ 0.35
PTPRK-218ENST00000525459 GID8Q9NWU2 228 aa17.26■□□□□ 0.35
PTPRK-218ENST00000525459 TRBV5-3A0A0A0MS03 114 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 OR6C70A6NIJ9 312 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 IL12BP29460 328 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 LCN1P31025 176 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 GABRA3P34903 492 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 CD96P40200 585 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 MAN2A2P49641 1150 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 PNLIPRP2P54317 469 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 EFR3AQ14156 821 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 OR1C1Q15619 314 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 DUSP5Q16690 384 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 ZNF791Q3KP31 576 aaPredicted RBP17.25■□□□□ 0.35
PTPRK-218ENST00000525459 ATAD3BQ5T9A4 648 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 LYPD8Q6UX82 237 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 C16orf47Q6ZP98 133 aaPredicted RBP17.25■□□□□ 0.35
PTPRK-218ENST00000525459 RETREG3Q86VR2 466 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 EXD3Q8N9H8 876 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 OR52N2Q8NGI0 321 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 ROPN1LQ96C74 230 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 OMA1Q96E52 524 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 SLC35A4Q96G79 324 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 OR7D2Q96RA2 312 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 G6PC3Q9BUM1 346 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.25■□□□□ 0.359e-8■□□□□ 11.2
PTPRK-218ENST00000525459 ZBTB20Q9HC78 741 aaPredicted RBP17.25■□□□□ 0.35
PTPRK-218ENST00000525459 TIMMDC1Q9NPL8 285 aa17.25■□□□□ 0.35
PTPRK-218ENST00000525459 EML6Q6ZMW3 1958 aa17.24■□□□□ 0.35
PTPRK-218ENST00000525459 LOC100653049A0A140TA62 436 aa17.24■□□□□ 0.35
PTPRK-218ENST00000525459 EVPLLA8MZ36 301 aa17.24■□□□□ 0.35
PTPRK-218ENST00000525459 CLIC1O00299 241 aa17.24■□□□□ 0.35
PTPRK-218ENST00000525459 FBP2O00757 339 aa17.24■□□□□ 0.35
PTPRK-218ENST00000525459 KRT34O76011 436 aa17.24■□□□□ 0.35
PTPRK-218ENST00000525459 OR6B1O95007 311 aa17.24■□□□□ 0.35
PTPRK-218ENST00000525459 PDGFAP04085 211 aa17.24■□□□□ 0.35
PTPRK-218ENST00000525459 CD46P15529 392 aa17.24■□□□□ 0.35
PTPRK-218ENST00000525459 POU6F2P78424 691 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms