RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 NR1H4Q96RI1 486 aaPredicted RBP6.2□□□□□ -1.42
NEDD8-203ENST00000524927 LYSMD1Q96S90 227 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 HEMGNQ9BXL5 484 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 TTTY12Q9BZ98 90 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 AAMDCQ9H7C9 122 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 MKKSQ9NPJ1 570 aaPredicted RBP6.2□□□□□ -1.42
NEDD8-203ENST00000524927 TRPC4Q9UBN4 977 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 PCDHGB5Q9Y5G0 923 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 CLDN16Q9Y5I7 305 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 ALPK2Q86TB3 2170 aa6.2□□□□□ -1.42
NEDD8-203ENST00000524927 A0A0A0MQY5 61 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 PVALEFA0A1B0GWK0 134 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 PRPF4O43172 522 aaKnown RBP eCLIP6.19□□□□□ -1.421e-7■□□□□ 8.7
NEDD8-203ENST00000524927 ZNF354AO60765 605 aaPredicted RBP6.19□□□□□ -1.42
NEDD8-203ENST00000524927 NDUFS7O75251 213 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 SOD3P08294 240 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 DANCRP0C864 163 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 NR2F2P24468 414 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 MCM3P25205 808 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 PSMA4P25789 261 aaKnown RBP6.19□□□□□ -1.42
NEDD8-203ENST00000524927 POU1F1P28069 291 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 GCH1P30793 250 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 PRKCIP41743 596 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 CCR8P51685 355 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 TMEM115Q12893 351 aaPredicted RBP6.19□□□□□ -1.42
NEDD8-203ENST00000524927 FOXF2Q12947 444 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 ANKRD20A8PQ5CZ79 823 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 BEX5Q5H9J7 111 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 CEP78Q5JTW2 689 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 NSUN5P2Q63ZY6 315 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 ISM2Q6H9L7 571 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 C11orf87Q6NUJ2 197 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 LUZP2Q86TE4 346 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 CNGA4Q8IV77 575 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 DPP10Q8N608 796 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 BRSK1Q8TDC3 778 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 RXFP2Q8WXD0 754 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 NTAN1Q96AB6 310 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 C11orf70Q9BRQ4 267 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 TUBGCP2Q9BSJ2 902 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 TMEM204Q9BSN7 226 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 SFXN3Q9BWM7 321 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 RAB11FIP5Q9BXF6 653 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 PANK2Q9BZ23 570 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 PIGMQ9H3S5 423 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 EIF2B3Q9NR50 452 aaKnown RBP6.19□□□□□ -1.42
NEDD8-203ENST00000524927 PAPOLBQ9NRJ5 636 aaKnown RBP6.19□□□□□ -1.42
NEDD8-203ENST00000524927 SNTG1Q9NSN8 517 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 TMEM45AQ9NWC5 275 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 TRMT1Q9NXH9 659 aaKnown RBP6.19□□□□□ -1.42
NEDD8-203ENST00000524927 SPHK1Q9NYA1 384 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 NFKBIL1Q9UBC1 381 aaPredicted RBP6.19□□□□□ -1.42
NEDD8-203ENST00000524927 SPRR3Q9UBC9 169 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 CDC14AQ9UNH5 594 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 PSAT1Q9Y617 370 aa6.19□□□□□ -1.42
NEDD8-203ENST00000524927 TRGV5A0A0B4J1U4 118 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 IGHV3-20A0A0C4DH32 117 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 C1orf232A0A0U1RR37 186 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 SLC5A10A0PJK1 596 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 RBMY1BA6NDE4 496 aaKnown RBP6.18□□□□□ -1.42
NEDD8-203ENST00000524927 RBMY1EA6NEQ0 496 aaKnown RBP6.18□□□□□ -1.42
NEDD8-203ENST00000524927 A8MXE2 369 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 CDC7O00311 574 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 PPP6CO00743 305 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 EPHB6O15197 1021 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 SLC16A5O15375 505 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 GFPT2O94808 682 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 LETM1O95202 739 aaPredicted RBP6.18□□□□□ -1.42
NEDD8-203ENST00000524927 CCNDBP1O95273 360 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 MT-CYBP00156 380 aaPredicted RBP6.18□□□□□ -1.42
NEDD8-203ENST00000524927 RBMY1DP0C7P1 496 aaKnown RBP6.18□□□□□ -1.42
NEDD8-203ENST00000524927 CERS1P27544 350 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 USP8P40818 1118 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 PRCPP42785 496 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 NUDT6P53370 316 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 RPS13P62277 151 aaKnown RBP6.18□□□□□ -1.42
NEDD8-203ENST00000524927 IL10RBQ08334 325 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 SLC10A7Q0GE19 358 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 MAMLD1Q13495 774 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 SLC10A1Q14973 349 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 TAF11Q15544 211 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 CBWD6Q4V339 395 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 CBWD3Q5JTY5 395 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 KPRPQ5T749 579 aaPredicted RBP6.18□□□□□ -1.42
NEDD8-203ENST00000524927 RUSC1-AS1Q66K80 236 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 ADAM5Q6NVV9 412 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 KLHL24Q6TFL4 600 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 GPAT4Q86UL3 456 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 ADGRG3Q86Y34 549 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 CYP4Z2PQ8N1L4 340 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 TMEM251Q8N6I4 163 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 OR52E1Q8NGJ3 308 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 FLVCR1-AS1Q8TAF5 88 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 MRAPQ8TCY5 172 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 ZG16BQ96DA0 208 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 RMDN2Q96LZ7 410 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 TTC25Q96NG3 672 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 ZNF599Q96NL3 588 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 VPS35Q96QK1 796 aa6.18□□□□□ -1.42
NEDD8-203ENST00000524927 MGME1Q9BQP7 344 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms