RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 H7C417 338 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 CLGNO14967 610 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 ACOX3O15254 700 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 PLGP00747 810 aaPredicted RBP12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 AHSGP02765 367 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 GRK2P25098 689 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 TTKP33981 857 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 CASP2P42575 452 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 DSCR4P56555 118 aaPredicted RBP12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 RPS3AP61247 264 aaKnown RBP12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 SARNPP82979 210 aaKnown RBP12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 KIF5AQ12840 1032 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 KHDRBS2Q5VWX1 349 aaKnown RBP12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 RAET1LQ5VY80 246 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 ANKRD22Q5VYY1 191 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 PLD6Q8N2A8 252 aaKnown RBP12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 AGGF1Q8N302 714 aaeCLIP12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 ZCCHC7Q8N3Z6 543 aaKnown RBP12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 OR7G1Q8NGA0 311 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 GFM2Q969S9 779 aaKnown RBP12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 C3orf49Q96BT1 292 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 HBEGFQ99075 208 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 SOX7Q9BT81 388 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 ITPAQ9BY32 194 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 BHLHE41Q9C0J9 482 aaPredicted RBP12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 LACRTQ9GZZ8 138 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 OCEL1Q9H607 264 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 FOLH1BQ9HBA9 442 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 OARD1Q9Y530 152 aa12.33□□□□□ -0.44
NKX3-1-202ENST00000523261 A0A1W2PR48 441 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 OR2M5A3KFT3 312 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 AKR1B15C9JRZ8 316 aaPredicted RBP12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 H3BML4 177 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 LY6HO94772 140 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 NR2F6P10588 404 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 MLNP12872 115 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 IL32P24001 234 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 NR4A2P43354 598 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 MAGEA6P43360 314 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 EFNA4P52798 201 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 GAS1P54826 345 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 SGCBQ16585 318 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 SFRP5Q5T4F7 317 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 DEPDC1Q5TB30 811 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 MRM1Q6IN84 353 aaKnown RBP12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 CCDC170Q8IYT3 715 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 GABRG1Q8N1C3 465 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 LRRC17Q8N6Y2 441 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 OR4K17Q8NGC6 315 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 RNF138Q8WVD3 245 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 TMCO6Q96DC7 493 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 HES6Q96HZ4 224 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 TMEM79Q9BSE2 394 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 PRRG4Q9BZD6 226 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 OR51B5Q9H339 312 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 FBXO34Q9NWN3 711 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 XPR1Q9UBH6 696 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 ASB4Q9Y574 426 aa12.32□□□□□ -0.44
NKX3-1-202ENST00000523261 OR6C70A6NIJ9 312 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 E7EQL1 145 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 LINC01387J3KSC0 135 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 PLPP1O14494 284 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 TAPBPO15533 448 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 HK1P19367 917 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 LAPTM5Q13571 262 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 P2RY6Q15077 328 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 CCNG2Q16589 344 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 PAGE2BQ5JRK9 111 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 SEL1L2Q5TEA6 688 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 PPP4R4Q6NUP7 873 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 DRICH1Q6PGQ1 229 aaPredicted RBP12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 FADS6Q8N9I5 356 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 OR5M1Q8NGP8 315 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 FAM216AQ8WUB2 273 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 RGMAQ96B86 450 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 CMTM7Q96FZ5 175 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 COL21A1Q96P44 957 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 POTEKPQ9BYX7 375 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 DSN1Q9H410 356 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 C12orf49Q9H741 205 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 ASIC3Q9UHC3 531 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 TMEFF2Q9UIK5 374 aaPredicted RBP12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 METRNQ9UJH8 293 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 VWA7Q9Y334 891 aa12.31□□□□□ -0.44
NKX3-1-202ENST00000523261 PCNX3Q9H6A9 2034 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 CBFA2T2O43439 604 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 TMPRSS11DO60235 418 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 EPB42P16452 691 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 ZNF37AP17032 561 aaPredicted RBP12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 EPORP19235 508 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 TBX2Q13207 712 aaPredicted RBP12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 TSNQ15631 228 aaKnown RBP12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 HIST2H2ACQ16777 129 aaPredicted RBP12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 HIST2H2AA3Q6FI13 130 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 MFSD12Q6NUT3 480 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 TREML4Q6UXN2 200 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 GSTA5Q7RTV2 222 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 GGNQ86UU5 652 aa12.3□□□□□ -0.44
NKX3-1-202ENST00000523261 CCDC25Q86WR0 208 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms