RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 LRRC25Q8N386 305 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-210ENST00000522843 ZNF321PQ8N8H1 164 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 ZNF740Q8NDX6 193 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 SKA2Q8WVK7 121 aaPredicted RBP6.02□□□□□ -1.45
SDCBP-210ENST00000522843 VMP1Q96GC9 406 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 TRIM31Q9BZY9 425 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 EXO5Q9H790 373 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 XAB2Q9HCS7 855 aaKnown RBP6.02□□□□□ -1.45
SDCBP-210ENST00000522843 ACKR4Q9NPB9 350 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 TMEM184CQ9NVA4 438 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 KLHL28Q9NXS3 571 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 MED12LQ86YW9 2145 aa6.02□□□□□ -1.45
SDCBP-210ENST00000522843 YLPM1P49750 1951 aaKnown RBP6.02□□□□□ -1.45
SDCBP-210ENST00000522843 CMYA5Q8N3K9 4069 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 A0A096LNT2 108 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 TCRBV7S3A2A0A539 114 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 CD8B2A6NJW9 211 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 A8MXE2 369 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 E7EVH7 732 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 PRMT5O14744 637 aaPredicted RBP6.01□□□□□ -1.45
SDCBP-210ENST00000522843 CASKO14936 926 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 RIPK2O43353 540 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 ZFAND5O76080 213 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 CCNDBP1O95273 360 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 VSIG10L2P0DP72 767 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 EGR1P18146 543 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 CRYGSP22914 178 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 CCKARP32238 428 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 NPY2RP49146 381 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 HNRNPFP52597 415 aaKnown RBP6.01□□□□□ -1.45
SDCBP-210ENST00000522843 ATP5J2P56134 94 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 ARL4CP56559 192 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 RPS15AP62244 130 aaKnown RBP6.01□□□□□ -1.45
SDCBP-210ENST00000522843 SARNPP82979 210 aaKnown RBP6.01□□□□□ -1.45
SDCBP-210ENST00000522843 MEF2AQ02078 507 aaPredicted RBP6.01□□□□□ -1.45
SDCBP-210ENST00000522843 FAM27E3Q08E93 113 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 VEZF1Q14119 521 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 SLC29A2Q14542 456 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 PRPSAP1Q14558 356 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 TERF2Q15554 542 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 DEFB134Q4QY38 66 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 GAGE13Q4V321 117 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 ACSBG2Q5FVE4 666 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 C6orf52Q5T4I8 152 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 ANKRD22Q5VYY1 191 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 AFTPHQ6ULP2 937 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 DNM1P46Q6ZS02 220 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 CENPUQ71F23 418 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 STRA8Q7Z7C7 330 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 PRUNE1Q86TP1 453 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 CAND1Q86VP6 1230 aaKnown RBP6.01□□□□□ -1.45
SDCBP-210ENST00000522843 TDRPQ86YL5 185 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 PDIK1LQ8N165 341 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 CAMKVQ8NCB2 501 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 OR52K1Q8NGK4 314 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 OR4L1Q8NH43 312 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 MAGEC3Q8TD91 643 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 SLC44A1Q8WWI5 657 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 SLC13A3Q8WWT9 602 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 FAM136AQ96C01 138 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 PGM2Q96G03 612 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 BIRC8Q96P09 236 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 TRIB1Q96RU8 372 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 NAT9Q9BTE0 207 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 TSSK1BQ9BXA7 367 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 AICDAQ9GZX7 198 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 SACM1LQ9NTJ5 587 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 UTP6Q9NYH9 597 aaKnown RBP6.01□□□□□ -1.45
SDCBP-210ENST00000522843 TEX264Q9Y6I9 313 aa6.01□□□□□ -1.45
SDCBP-210ENST00000522843 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.01□□□□□ -1.45
SDCBP-210ENST00000522843 FREM1Q5H8C1 2179 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 C15orf38-AP3S2A0A0A6YYH1 394 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 SDR42E2A6NKP2 422 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 NIPSNAP2O75323 286 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 PLAUP00749 431 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 C1QAP02745 245 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 TMIGD3P0DMS9 266 aaPredicted RBP6□□□□□ -1.45
SDCBP-210ENST00000522843 ALOX12P18054 663 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 JAK1P23458 1154 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 IMPA1P29218 277 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 GRIA1P42261 906 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 HERC3Q15034 1050 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 ELAVL1Q15717 326 aaKnown RBP6□□□□□ -1.45
SDCBP-210ENST00000522843 ZNF791Q3KP31 576 aaPredicted RBP6□□□□□ -1.45
SDCBP-210ENST00000522843 TSTD2Q5T7W7 516 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 AGBL2Q5U5Z8 902 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 PTRHD1Q6GMV3 140 aaKnown RBP6□□□□□ -1.45
SDCBP-210ENST00000522843 CAPN13Q6MZZ7 669 aaPredicted RBP6□□□□□ -1.45
SDCBP-210ENST00000522843 PLEKHM3Q6ZWE6 761 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 FKBP9P1Q75LS8 142 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 OTOAQ7RTW8 1153 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 LINC00523Q86TU6 105 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6□□□□□ -1.45
SDCBP-210ENST00000522843 CA13Q8N1Q1 262 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 ARIH2OSQ8N7S6 290 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 MFSD9Q8NBP5 474 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 SLC22A8Q8TCC7 542 aa6□□□□□ -1.45
SDCBP-210ENST00000522843 SLC25A43Q8WUT9 341 aaPredicted RBP6□□□□□ -1.45
SDCBP-210ENST00000522843 ANKRD9Q96BM1 317 aaPredicted RBP6□□□□□ -1.45
SDCBP-210ENST00000522843 NTNG2Q96CW9 530 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms