RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 MEAF6Q9HAF1 191 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 NUP214P35658 2090 aaPredicted RBP16.36■□□□□ 0.21
CLK4-211ENST00000522556 SPTAN1Q13813 2472 aaKnown RBP16.36■□□□□ 0.21
CLK4-211ENST00000522556 NCOA6Q14686 2063 aaPredicted RBP16.35■□□□□ 0.21
CLK4-211ENST00000522556 GXYLT2A0PJZ3 443 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 ACOT7O00154 380 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 CCL21O00585 134 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 TP53I11O14683 189 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 GNB5O14775 395 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 ACOX3O15254 700 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 COQ9O75208 318 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 REM1O75628 298 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 BCAS2O75934 225 aaPredicted RBP16.35■□□□□ 0.21
CLK4-211ENST00000522556 PRPS2P11908 318 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 GPC1P35052 558 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 DCAF7P61962 342 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 EMX2Q04743 252 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 RBPJQ06330 500 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 HYAL4Q2M3T9 481 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 EMC4Q5J8M3 183 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 SZRD1Q7Z422 152 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 CD163Q86VB7 1156 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 RPRMLQ8N4K4 120 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 ZNF597Q96LX8 424 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 ADOQ96SZ5 270 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 WDR55Q9H6Y2 383 aaPredicted RBP16.35■□□□□ 0.21
CLK4-211ENST00000522556 MANSC1Q9H8J5 431 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 ZFP64Q9NPA5 681 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 TAS2R9Q9NYW1 312 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 SPRR3Q9UBC9 169 aa16.35■□□□□ 0.21
CLK4-211ENST00000522556 DOPEY1Q5JWR5 2465 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 GOLGA8QA0A0J9YX86 632 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 GOLGA8OA6NCC3 632 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 ANKRD33BA6NCL7 494 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 CAPN14A8MX76 684 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 C9JVG2 144 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 GOLGA8NF8WBI6 632 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 ADAM10O14672 748 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 ANKRD28O15084 1053 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 C6orf47O95873 294 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 IGKV1D-16P01601 117 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 ACP2P11117 423 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 TRPC1P48995 793 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 PRKAG1P54619 331 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 MANFP55145 182 aaKnown RBP16.34■□□□□ 0.21
CLK4-211ENST00000522556 ADORA2A-AS1P86434 159 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 GAB1Q13480 694 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 CDSNQ15517 529 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 LARP4Q71RC2 724 aaKnown RBP eCLIP16.34■□□□□ 0.21
CLK4-211ENST00000522556 TRILQ7L0X0 811 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 GALNT10Q86SR1 603 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 DOLPP1Q86YN1 238 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 WDR75Q8IWA0 830 aaKnown RBP16.34■□□□□ 0.21
CLK4-211ENST00000522556 PIK3R3Q92569 461 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 MTERF3Q96E29 417 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 ZBED6CLQ96FA7 236 aaPredicted RBP16.34■□□□□ 0.21
CLK4-211ENST00000522556 SLC35A4Q96G79 324 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 C16orf58Q96GQ5 468 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 COL21A1Q96P44 957 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 GNRHR2Q96P88 292 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 LMF2Q9BU23 707 aaKnown RBP16.34■□□□□ 0.21
CLK4-211ENST00000522556 METTL7AQ9H8H3 244 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 ACSS1Q9NUB1 689 aaPredicted RBP16.34■□□□□ 0.21
CLK4-211ENST00000522556 THAP1Q9NVV9 213 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 ASIC5Q9NY37 505 aa16.34■□□□□ 0.21
CLK4-211ENST00000522556 NOP53Q9NZM5 478 aaKnown RBP16.34■□□□□ 0.21
CLK4-211ENST00000522556 BOKQ9UMX3 212 aaPredicted RBP16.34■□□□□ 0.21
CLK4-211ENST00000522556 EIF3LQ9Y262 564 aaKnown RBP16.34■□□□□ 0.21
CLK4-211ENST00000522556 FLNBO75369 2602 aaKnown RBP16.33■□□□□ 0.21
CLK4-211ENST00000522556 MED12Q93074 2177 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 A0A1B0GUH1 482 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 PRAMEF25A6NGN4 478 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 NPIPA2E9PIF3 369 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 NPIPA3F8WFD2 350 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 ICOSLGO75144 302 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 SLITRK5O94991 958 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 IGHG3P01860 377 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 TPOP07202 933 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 CYP4B1P13584 511 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 NAGAP17050 411 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 COL8A1P27658 744 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 EPHA3P29320 983 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 PTGS2P35354 604 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 WNT3P56703 355 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 CLDN8P56748 225 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 CPTPQ5TA50 214 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 ANGPTL8Q6UXH0 198 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 BNC2Q6ZN30 1099 aaPredicted RBP16.33■□□□□ 0.2
CLK4-211ENST00000522556 HDXQ7Z353 690 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 NUP54Q7Z3B4 507 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 R3HCC1LQ7Z5L2 792 aaKnown RBP16.33■□□□□ 0.2
CLK4-211ENST00000522556 CLECL1Q8IZS7 167 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 ZFP28Q8NHY6 868 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 FAM57AQ8TBR7 257 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 ZNF75CPQ92670 426 aaPredicted RBP16.33■□□□□ 0.2
CLK4-211ENST00000522556 COQ8BQ96D53 544 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 FAM120BQ96EK7 910 aaKnown RBP16.33■□□□□ 0.2
CLK4-211ENST00000522556 TEX37Q96LM6 180 aa16.33■□□□□ 0.2
CLK4-211ENST00000522556 SECISBP2Q96T21 854 aaKnown RBP16.33■□□□□ 0.2
CLK4-211ENST00000522556 YIPF4Q9BSR8 244 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms