RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 ITGA9Q13797 1035 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 TFDP1Q14186 410 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 CHI3L2Q15782 390 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 HSDL1Q3SXM5 330 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 PIK3CD-AS1Q5SR53 167 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 CELF3Q5SZQ8 465 aaKnown RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 ABHD17BQ5VST6 288 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 DMKNQ6E0U4 476 aaPredicted RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 PTRHD1Q6GMV3 140 aaKnown RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 TWF2Q6IBS0 349 aaKnown RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 C8orf74Q6P047 294 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 FAM122CQ6P4D5 195 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 DHRS11Q6UWP2 260 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 DEF8Q6ZN54 512 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 FAM57BQ71RH2 274 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 Q7L0L9 218 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 SATL1Q86VE3 508 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 FJX1Q86VR8 437 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 RBM45Q8IUH3 476 aaKnown RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 C12orf56Q8IXR9 622 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 SELENOHQ8IZQ5 122 aaKnown RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 OR51L1Q8NGJ5 315 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 OR4C15Q8NGM1 316 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 OR1L6Q8NGR2 347 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 OR13C5Q8NGS8 318 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 OR6S1Q8NH40 331 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 OSR1Q8TAX0 266 aaPredicted RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 CD99L2Q8TCZ2 262 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 TCP11Q8WWU5 503 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 MYLPFQ96A32 169 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 MRGPRFQ96AM1 343 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 ZFYVE19Q96K21 471 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 TOX2Q96NM4 488 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 ERGIC2Q96RQ1 377 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 SLC29A1Q99808 456 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 RBM4BQ9BQ04 359 aaKnown RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 TRAF4Q9BUZ4 470 aaPredicted RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 RBM4Q9BWF3 364 aaKnown RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 PANK2Q9BZ23 570 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 HDHD2Q9H0R4 259 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 RAB1BQ9H0U4 201 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 UCK1Q9HA47 277 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 CSNK1G1Q9HCP0 422 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 CCNB1IP1Q9NPC3 277 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 C2orf42Q9NWW7 574 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 ADAM22Q9P0K1 906 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 PPP4R1LQ9P1A2 415 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 UXTQ9UBK9 157 aaPredicted RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 PRDM4Q9UKN5 801 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 FZR1Q9UM11 496 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 STUB1Q9UNE7 303 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 PPIL1Q9Y3C6 166 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 PAM16Q9Y3D7 125 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 KCTD3Q9Y597 815 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 TIMM10BQ9Y5J6 103 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 DMRT1Q9Y5R6 373 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 TRBV5-3A0A0A0MS03 114 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 LRRIQ3A6PVS8 624 aaPredicted RBP3.61□□□□□ -1.83
SKP1-209ENST00000522552 VGLL3A8MV65 326 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 IMPA2O14732 288 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 MID1O15344 667 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 LATO43561 262 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 SRPX2O60687 465 aaPredicted RBP3.61□□□□□ -1.83
SKP1-209ENST00000522552 OR2J3O76001 311 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 B3GAT3O94766 335 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 SERPINE2P07093 398 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 SLC35G4P0C7Q5 338 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 NQO2P16083 231 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 ACADSP16219 412 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 TBXA2RP21731 343 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 GNLYP22749 145 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 GLRA1P23415 457 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 MMP12P39900 470 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 NAA10P41227 235 aaPredicted RBP3.61□□□□□ -1.83
SKP1-209ENST00000522552 CRYBB2P43320 205 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 CCNHP51946 323 aaPredicted RBP3.61□□□□□ -1.83
SKP1-209ENST00000522552 RPS4XP62701 263 aaKnown RBP3.61□□□□□ -1.83
SKP1-209ENST00000522552 MRPS6P82932 125 aaKnown RBP3.61□□□□□ -1.83
SKP1-209ENST00000522552 CDK16Q00536 496 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 SIGLEC14Q08ET2 396 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 C1orf61Q13536 156 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 KLF5Q13887 457 aaPredicted RBP3.61□□□□□ -1.83
SKP1-209ENST00000522552 KNOP1Q1ED39 458 aaKnown RBP3.61□□□□□ -1.83
SKP1-209ENST00000522552 PAGE2BQ5JRK9 111 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 OTUD3Q5T2D3 398 aaPredicted RBP3.61□□□□□ -1.83
SKP1-209ENST00000522552 OR4C11Q6IEV9 310 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 ZNF562Q6V9R5 426 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 LCNL1Q6ZST4 164 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 FRA10AC1Q70Z53 315 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 GPR142Q7Z601 462 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 NELFCDQ8IXH7 590 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 GPR65Q8IYL9 337 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 RCOR2Q8IZ40 523 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 CLDN19Q8N6F1 224 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 OR9G4Q8NGQ1 327 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 LRRC15Q8TF66 581 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 IGFBPL1Q8WX77 278 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 CDKL2Q92772 493 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 UPRTQ96BW1 309 aa3.61□□□□□ -1.83
SKP1-209ENST00000522552 MTBPQ96DY7 904 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms