RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 ERCC6LQ2NKX8 1250 aa10.4□□□□□ -0.74
MRPS28-206ENST00000520946 BEX5Q5H9J7 111 aa10.4□□□□□ -0.74
MRPS28-206ENST00000520946 ZNF474Q6S9Z5 364 aaPredicted RBP10.4□□□□□ -0.74
MRPS28-206ENST00000520946 GOLGA7Q7Z5G4 137 aa10.4□□□□□ -0.74
MRPS28-206ENST00000520946 CMC1Q7Z7K0 106 aa10.4□□□□□ -0.74
MRPS28-206ENST00000520946 NXNL1Q96CM4 212 aa10.4□□□□□ -0.74
MRPS28-206ENST00000520946 TRMT61AQ96FX7 289 aaKnown RBP10.4□□□□□ -0.74
MRPS28-206ENST00000520946 ATOH8Q96SQ7 321 aa10.4□□□□□ -0.74
MRPS28-206ENST00000520946 ZNF717Q9BY31 904 aaPredicted RBP10.4□□□□□ -0.74
MRPS28-206ENST00000520946 ELOVL6Q9H5J4 265 aa10.4□□□□□ -0.74
MRPS28-206ENST00000520946 SDHAF3Q9NRP4 125 aa10.4□□□□□ -0.74
MRPS28-206ENST00000520946 SENP1Q9P0U3 644 aa10.4□□□□□ -0.74
MRPS28-206ENST00000520946 STOML1Q9UBI4 398 aa10.4□□□□□ -0.74
MRPS28-206ENST00000520946 FBXL2Q9UKC9 423 aa10.4□□□□□ -0.74
MRPS28-206ENST00000520946 ADAM29Q9UKF5 820 aa10.4□□□□□ -0.74
MRPS28-206ENST00000520946 ADAM21Q9UKJ8 722 aa10.4□□□□□ -0.74
MRPS28-206ENST00000520946 PLLPQ9Y342 182 aa10.4□□□□□ -0.74
MRPS28-206ENST00000520946 OR10H1Q9Y4A9 318 aa10.4□□□□□ -0.74
MRPS28-206ENST00000520946 MED12Q93074 2177 aa10.4□□□□□ -0.74
MRPS28-206ENST00000520946 FBN3Q75N90 2809 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 A0A087X1B8 175 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 TCRBV9S1A1TA0A576 114 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 OR6C70A6NIJ9 312 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 SIAH2O43255 324 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 EMC8O43402 210 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 TMCC2O75069 709 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 GSTA2P09210 222 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 NID1P14543 1247 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 PPP3CBP16298 524 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 HK1P19367 917 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 GRK2P25098 689 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 GMPRP36959 345 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 PTGDSP41222 190 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 CLK3P49761 638 aaKnown RBP10.39□□□□□ -0.75
MRPS28-206ENST00000520946 CTBP2P56545 445 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 PRICKLE4Q2TBC4 344 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 SLC48A1Q6P1K1 146 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 LARP4Q71RC2 724 aaKnown RBP eCLIP10.39□□□□□ -0.75
MRPS28-206ENST00000520946 CCDC91Q7Z6B0 441 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 ZNF610Q8N9Z0 462 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 PPP1R14CQ8TAE6 165 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 RHEBL1Q8TAI7 183 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 KCTD4Q8WVF5 259 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 TMEM158Q8WZ71 300 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 CAVIN3Q969G5 261 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 GFM2Q969S9 779 aaKnown RBP10.39□□□□□ -0.75
MRPS28-206ENST00000520946 GTPBP3Q969Y2 492 aaKnown RBP10.39□□□□□ -0.75
MRPS28-206ENST00000520946 CTHRC1Q96CG8 243 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 HS3ST6Q96QI5 342 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 MCMBPQ9BTE3 642 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 G6PC3Q9BUM1 346 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 MRPL1Q9BYD6 325 aaKnown RBP10.39□□□□□ -0.75
MRPS28-206ENST00000520946 PTGES2Q9H7Z7 377 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 NOL11Q9H8H0 719 aaKnown RBP10.39□□□□□ -0.75
MRPS28-206ENST00000520946 YAE1D1Q9NRH1 226 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 GIMAP4Q9NUV9 329 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 NMRK1Q9NWW6 199 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 MAT2BQ9NZL9 334 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 SLC12A4Q9UP95 1085 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 EMC9Q9Y3B6 208 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 MRPS18CQ9Y3D5 142 aaKnown RBP10.39□□□□□ -0.75
MRPS28-206ENST00000520946 PCDHA9Q9Y5H5 950 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 MED12LQ86YW9 2145 aa10.39□□□□□ -0.75
MRPS28-206ENST00000520946 NSD1Q96L73 2696 aaPredicted RBP10.39□□□□□ -0.75
MRPS28-206ENST00000520946 H3BML4 177 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 CCDC188H7C350 402 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 LINC01387J3KSC0 135 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 EIF3HO15372 352 aaKnown RBP eCLIP10.38□□□□□ -0.75
MRPS28-206ENST00000520946 HCRTR2O43614 444 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 SCO2O43819 266 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 TNFRSF21O75509 655 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 ATP1B1P05026 303 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 CD8BP10966 210 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 FCGR2AP12318 317 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 S1PR1P21453 382 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 STX2P32856 288 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 KIR2DL2P43627 348 aaPredicted RBP10.38□□□□□ -0.75
MRPS28-206ENST00000520946 GPX6P59796 221 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 PSPHP78330 225 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 OCRLQ01968 901 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 DLG1Q12959 904 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 TNK1Q13470 666 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 ACAP2Q15057 778 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 PON3Q15166 354 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 CLEC12BQ2HXU8 276 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 TRMT12Q53H54 448 aaKnown RBP10.38□□□□□ -0.75
MRPS28-206ENST00000520946 C10orf62Q5T681 223 aaPredicted RBP10.38□□□□□ -0.75
MRPS28-206ENST00000520946 FRG2Q64ET8 278 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 ZNF704Q6ZNC4 412 aaPredicted RBP10.38□□□□□ -0.75
MRPS28-206ENST00000520946 STK32CQ86UX6 486 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 CCDC25Q86WR0 208 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 WFDC8Q8IUA0 241 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 L3MBTL4Q8NA19 623 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 WDR20Q8TBZ3 569 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 TRPC4APQ8TEL6 797 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 FIG4Q92562 907 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 MRRFQ96E11 262 aaKnown RBP10.38□□□□□ -0.75
MRPS28-206ENST00000520946 CDK15Q96Q40 435 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 FRG2BQ96QU4 278 aa10.38□□□□□ -0.75
MRPS28-206ENST00000520946 PIGQQ9BRB3 760 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms