RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 PRAMEF25A6NGN4 478 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 A6NNC1 897 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 B4DXG7 233 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 GOLGA8RI6L899 631 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 UBFD1O14562 309 aaKnown RBP11.31□□□□□ -0.6
CSMD1-205ENST00000519623 PLOD3O60568 738 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 TSPAN2O60636 221 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 IL18BPO95998 194 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 ENO1P06733 434 aaKnown RBP11.31□□□□□ -0.6
CSMD1-205ENST00000519623 GSTA1P08263 222 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 PYGBP11216 843 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 HMOX2P30519 316 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 PKNOX1P55347 436 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 GFRA1P56159 465 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 CORO7P57737 925 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 ACSM2AQ08AH3 577 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 LCP2Q13094 533 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 SLC29A2Q14542 456 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 HEPACAMQ14CZ8 416 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 FLYWCH1Q4VC44 716 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 SPIN4Q56A73 249 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 ACSM2BQ68CK6 577 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 SCIMPQ6UWF3 145 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 NPSR1Q6W5P4 371 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 SH2D5Q6ZV89 423 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 PLCZ1Q86YW0 608 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 IFT20Q8IY31 132 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 SAMD14Q8IZD0 417 aaPredicted RBP11.31□□□□□ -0.6
CSMD1-205ENST00000519623 C9orf106Q8NAJ2 232 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.31□□□□□ -0.6
CSMD1-205ENST00000519623 ACMSDQ8TDX5 336 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 RNF138Q8WVD3 245 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 TMCO6Q96DC7 493 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 LRRC46Q96FV0 321 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 UCN2Q96RP3 112 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 KCNA7Q96RP8 456 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 ADOQ96SZ5 270 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 TUBA1CQ9BQE3 449 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 G6PC3Q9BUM1 346 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 CXXC4Q9H2H0 198 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 GSTO2Q9H4Y5 243 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 FOXD3Q9UJU5 478 aaPredicted RBP11.31□□□□□ -0.6
CSMD1-205ENST00000519623 EMCNQ9ULC0 261 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 CBLCQ9ULV8 474 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 MRPS18CQ9Y3D5 142 aaKnown RBP11.31□□□□□ -0.6
CSMD1-205ENST00000519623 NF1P21359 2839 aa11.31□□□□□ -0.6
CSMD1-205ENST00000519623 MYO1GB0I1T2 1018 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 G3V2L1 256 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 ZIC3O60481 467 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 ABCB7O75027 752 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 ERN1O75460 977 aaKnown RBP11.3□□□□□ -0.6
CSMD1-205ENST00000519623 ANXA4P09525 319 aaPredicted RBP11.3□□□□□ -0.6
CSMD1-205ENST00000519623 EPXP11678 715 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 CYP4B1P13584 511 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 TIA1P31483 386 aaKnown RBP eCLIP11.3□□□□□ -0.6
CSMD1-205ENST00000519623 MPIP34949 423 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 OPRM1P35372 400 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 STARP49675 285 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 LHX2P50458 406 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 GAS1P54826 345 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 FOXA1P55317 472 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 BTKQ06187 659 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 FOXF2Q12947 444 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 CDC20BQ86Y33 519 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 OR7G2Q8NG99 324 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 OR4N2Q8NGD1 307 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 OR14L1PQ8NHC6 308 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 RDH11Q8TC12 318 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 NINJ1Q92982 152 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 FOXC2Q99958 501 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 EBPLQ9BY08 206 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 CLEC4MQ9H2X3 399 aaPredicted RBP11.3□□□□□ -0.6
CSMD1-205ENST00000519623 FOLH1BQ9HBA9 442 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 PFDN4Q9NQP4 134 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 CCM2LQ9NUG4 571 aaPredicted RBP11.3□□□□□ -0.6
CSMD1-205ENST00000519623 TAS2R10Q9NYW0 307 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 DCDC2Q9UHG0 476 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 ST6GALNAC2Q9UJ37 374 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 FBXL2Q9UKC9 423 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 STK38LQ9Y2H1 464 aa11.3□□□□□ -0.6
CSMD1-205ENST00000519623 A0A1W2PPM1 405 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 TUBAL3A6NHL2 446 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 RCBTB2O95199 551 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 DDCP20711 480 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 SRD5A2P31213 254 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 GSTM5P46439 218 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 PNLIPRP2P54317 469 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 PSG6Q00889 435 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 SRYQ05066 204 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 C2orf80Q0P641 193 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 EFR3AQ14156 821 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 RCAN2Q14206 197 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 ERCC6LQ2NKX8 1250 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 OR5M10Q6IEU7 315 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 ENPP6Q6UWR7 440 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 PLXDC2Q6UX71 529 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 LARP4Q71RC2 724 aaKnown RBP eCLIP11.29□□□□□ -0.6
CSMD1-205ENST00000519623 KIF18BQ86Y91 864 aa11.29□□□□□ -0.6
CSMD1-205ENST00000519623 SLC44A2Q8IWA5 706 aaPredicted RBP11.29□□□□□ -0.6
CSMD1-205ENST00000519623 LINC01560Q8TB33 94 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms