RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 NPIPA5E9PKD4 350 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 ACOT7O00154 380 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 TFECO14948 347 aaPredicted RBP20.19■□□□□ 0.82
VEGFA-217ENST00000518538 UBDO15205 165 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 CFLARO15519 480 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 ABCB7O75027 752 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 UGT2B11O75310 529 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 REM1O75628 298 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 KRT20P35900 424 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 IDH3AP50213 366 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 NME5P56597 212 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 KCNJ2P63252 427 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 FOXO1Q12778 655 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 VPS26BQ4G0F5 336 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 PDCD4Q53EL6 469 aaKnown RBP20.19■□□□□ 0.82
VEGFA-217ENST00000518538 SPANXN4Q5MJ08 99 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 ANXA8L1Q5VT79 327 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 TMEM198Q66K66 360 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 TMEM81Q6P7N7 255 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 GFRALQ6UXV0 394 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 BNC2Q6ZN30 1099 aaPredicted RBP20.19■□□□□ 0.82
VEGFA-217ENST00000518538 WDR53Q7Z5U6 358 aaPredicted RBP20.19■□□□□ 0.82
VEGFA-217ENST00000518538 SLC22A16Q86VW1 577 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 CDRT4Q8N9R6 151 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 OR4N2Q8NGD1 307 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 COL21A1Q96P44 957 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 DOHHQ9BU89 302 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 TTTY12Q9BZ98 90 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 CXorf36Q9H7Y0 433 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 IL1RL2Q9HB29 575 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 TUBA8Q9NY65 449 aaPredicted RBP20.19■□□□□ 0.82
VEGFA-217ENST00000518538 NPIPA1Q9UND3 350 aa20.19■□□□□ 0.82
VEGFA-217ENST00000518538 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.19■□□□□ 0.82
VEGFA-217ENST00000518538 EXPH5Q8NEV8 1989 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 POLR3GO15318 223 aaPredicted RBP20.18■□□□□ 0.82
VEGFA-217ENST00000518538 TSPAN2O60636 221 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 EDF1O60869 148 aaKnown RBP20.18■□□□□ 0.82
VEGFA-217ENST00000518538 WISP2O76076 250 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 GLSO94925 669 aaPredicted RBP20.18■□□□□ 0.82
VEGFA-217ENST00000518538 UNC5CO95185 931 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 IL12BP29460 328 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 S100A3P33764 101 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 MAP3K8P41279 467 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 CASP3P42574 277 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 CCT3P49368 545 aaKnown RBP20.18■□□□□ 0.82
VEGFA-217ENST00000518538 AQP5P55064 265 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 HBA1P69905 142 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 PHC1P78364 1004 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 GAB1Q13480 694 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 HYAL4Q2M3T9 481 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 FAM174BQ3ZCQ3 159 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 MFSD12Q6NUT3 480 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 ZCCHC12Q6PEW1 402 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 CLECL1Q8IZS7 167 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 VPS37AQ8NEZ2 397 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 OR56A1Q8NGH5 318 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 SFXN5Q8TD22 340 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 MOAP1Q96BY2 351 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 MARK4Q96L34 752 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 ZBTB18Q99592 522 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 ANGPTL4Q9BY76 406 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 TCF7L2Q9NQB0 619 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 CBLCQ9ULV8 474 aa20.18■□□□□ 0.82
VEGFA-217ENST00000518538 BOKQ9UMX3 212 aaPredicted RBP20.18■□□□□ 0.82
VEGFA-217ENST00000518538 PRSS51A0A1B0GVH4 220 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 ASNA1O43681 348 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 HS6ST1O60243 411 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 SCN2BO60939 215 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 NKX2-2O95096 273 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 SNX4O95219 450 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 IL12AP29459 219 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 GABRA3P34903 492 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 PRIM2P49643 509 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 PNLIPRP2P54317 469 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 KCNK10P57789 538 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 PPIAP62937 165 aaKnown RBP20.17■□□□□ 0.82
VEGFA-217ENST00000518538 EFR3AQ14156 821 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 EIF2S3LQ2VIR3 472 aaKnown RBP20.17■□□□□ 0.82
VEGFA-217ENST00000518538 SPDYE7PQ495Y7 208 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 BICRALQ6AI39 1079 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 DESI1Q6ICB0 168 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 GLB1L3Q8NCI6 653 aaPredicted RBP20.17■□□□□ 0.82
VEGFA-217ENST00000518538 TMCO6Q96DC7 493 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 RILPQ96NA2 401 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 NODALQ96S42 347 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 ADOQ96SZ5 270 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 EBF4Q9BQW3 602 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 CCDC28BQ9BUN5 200 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 METTL7AQ9H8H3 244 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 SDR39U1Q9NRG7 319 aaPredicted RBP20.17■□□□□ 0.82
VEGFA-217ENST00000518538 FAM120CQ9NX05 1096 aaKnown RBP20.17■□□□□ 0.82
VEGFA-217ENST00000518538 MRTO4Q9UKD2 239 aaKnown RBP20.17■□□□□ 0.82
VEGFA-217ENST00000518538 PCDHGB4Q9UN71 923 aa20.17■□□□□ 0.82
VEGFA-217ENST00000518538 FASNP49327 2511 aaKnown RBP20.17■□□□□ 0.82
VEGFA-217ENST00000518538 FAM166BA8MTA8 275 aa20.16■□□□□ 0.82
VEGFA-217ENST00000518538 TRIM3O75382 744 aaPredicted RBP20.16■□□□□ 0.82
VEGFA-217ENST00000518538 MRPS22P82650 360 aaKnown RBP20.16■□□□□ 0.82
VEGFA-217ENST00000518538 SNTA1Q13424 505 aa20.16■□□□□ 0.82
VEGFA-217ENST00000518538 DECR1Q16698 335 aa20.16■□□□□ 0.82
VEGFA-217ENST00000518538 EXOSC6Q5RKV6 272 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms