RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 TTC27Q6P3X3 843 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 GUSBP11Q6P575 273 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 TMCO3Q6UWJ1 677 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 ZBTB49Q6ZSB9 765 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 NTM-AS1Q6ZSK4 140 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 CHST3Q7LGC8 479 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 RALGPS2Q86X27 583 aaPredicted RBP-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 C17orf82Q86X59 251 aaPredicted RBP-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 SNX32Q86XE0 403 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 PCP2Q8IVA1 136 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 RIMKLAQ8IXN7 391 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 ZNF679Q8IYX0 411 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 APCDD1Q8J025 514 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 LGI3Q8N145 548 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 ESX1Q8N693 406 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 LRRC52Q8N7C0 313 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 ZNF557Q8N988 423 aaPredicted RBP-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 LRRC75AQ8NAA5 344 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 NOA1Q8NC60 698 aaKnown RBP-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 LY6G5BQ8NDX9 201 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 ZNF680Q8NEM1 530 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 OR2AP1Q8NGE2 309 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 OR5W2Q8NH69 310 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 NFKBIDQ8NI38 313 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 RFESDQ8TAC1 157 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 C8orf46Q8TAG6 207 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 MUC7Q8TAX7 377 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 FNDC8Q8TC99 324 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 METTL6Q8TCB7 284 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 ZFP90Q8TF47 636 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 RNF139Q8WU17 664 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 UBTD2Q8WUN7 234 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 TFB1MQ8WVM0 346 aaKnown RBP-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 SGCDQ92629 289 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 MRPL24Q96A35 216 aaKnown RBP-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 PYCR2Q96C36 320 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 L3HYPDHQ96EM0 354 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 RNF125Q96EQ8 232 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 UBXN10Q96LJ8 280 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 SFXN2Q96NB2 322 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 MS4A10Q96PG2 267 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 CSPG4P5Q96PW8 444 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 CCNL2Q96S94 520 aaPredicted RBP-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 SORT1Q99523 831 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 ARHGDIGQ99819 225 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 RASL11BQ9BPW5 248 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 ZNF559Q9BR84 538 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 ALKBH7Q9BT30 221 aaPredicted RBP-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 TMEM121Q9BTD3 319 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 RNF126Q9BV68 326 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 NUSAP1Q9BXS6 441 aaKnown RBP-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 ZNF717Q9BY31 904 aaPredicted RBP-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 PRRG4Q9BZD6 226 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 TRIM9Q9C026 710 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 UBA5Q9GZZ9 404 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 TMEM245Q9H330 911 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 HRH4Q9H3N8 390 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 ACTL8Q9H568 366 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 ALG9Q9H6U8 611 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 RNF121Q9H920 327 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 MEPEQ9NQ76 525 aaPredicted RBP-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 RRP7BPQ9NSQ0 103 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 FAM212BQ9NTI7 297 aaPredicted RBP-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 MED17Q9NVC6 651 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 DNAJC11Q9NVH1 559 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 PPP1R14DQ9NXH3 145 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 RPS6KL1Q9Y6S9 549 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 TRIP11Q15643 1979 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 ANKRD12Q6UB98 2062 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 PALLDQ8WX93 1383 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 PTPRZ1P23471 2315 aaPredicted RBP-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 DOCK6Q96HP0 2047 aa-0.6□□□□□ -2.51
SNORA40.17-201ENST00000517256 ANK2Q01484 3957 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 MYO9BQ13459 2157 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 TRAV24A0A0B4J272 114 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 SH3PXD2BA1X283 911 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 C4orf51C9J302 202 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 SGK1O00141 431 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 SCAMP1O15126 338 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 PPM1GO15355 546 aaPredicted RBP-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 ZNF73O43830 326 aaPredicted RBP-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 EFNA2O43921 213 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 HS6ST1O60243 411 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 PRAMEF11O60813 436 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 MITFO75030 526 aaPredicted RBP-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 SDC3O75056 442 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 ZNF780AO75290 641 aaPredicted RBP-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 SUPT3HO75486 399 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 SCRG1O75711 98 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 GLSO94925 669 aaPredicted RBP-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 AIFM1O95831 613 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 RAB40ALP0C0E4 278 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 INAFM2P0DMQ5 153 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 TCF4P15884 667 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 VDAC1P21796 283 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 GJB2P29033 226 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 ADSSP30520 456 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 SRD5A2P31213 254 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 BTDP43251 543 aa-0.61□□□□□ -2.51
SNORA40.17-201ENST00000517256 NMUP48645 174 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms