RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 FDCSPQ8NFU4 85 aa5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 M1APQ8TC57 530 aa5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 BRIX1Q8TDN6 353 aaKnown RBP5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 TSPEARQ8WU66 669 aa5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 DAZLQ92904 295 aaKnown RBP5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 RIT1Q92963 219 aa5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 C11orf24Q96F05 449 aaPredicted RBP5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 IMMP1LQ96LU5 166 aa5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 BBS4Q96RK4 519 aa5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 PRPF18Q99633 342 aaKnown RBP5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 WDR77Q9BQA1 342 aaPredicted RBP5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 SLC25A23Q9BV35 468 aa5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CNPPD1Q9BV87 410 aa5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 DEFB126Q9BYW3 111 aa5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 OR8D2Q9GZM6 311 aa5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 MEAF6Q9HAF1 191 aa5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 MYNNQ9NPC7 610 aa5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ADAP2Q9NPF8 381 aa5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 MIEF1Q9NQG6 463 aa5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 ZNF71Q9NQZ8 489 aaPredicted RBP5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CES1P1Q9UKY3 287 aa5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 CLDN16Q9Y5I7 305 aa5.4□□□□□ -1.54
SCARNA6.1-201ENST00000516989 PTPRQQ9UMZ3 2332 aa5.4□□□□□ -1.55
SCARNA6.1-201ENST00000516989 A0A1W2PS29 197 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 SYNDIG1LA6NDD5 238 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 SAGE2PA6NJ88 616 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 GABRR3A8MPY1 467 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 MKRN2OSH3BPM6 223 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 ZNF195O14628 629 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 UBDO15205 165 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 POLR3GO15318 223 aaPredicted RBP5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 KLHL41O60662 606 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 EDF1O60869 148 aaKnown RBP5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 TGDSO95455 350 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 PRR35P0CG20 571 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 DDX5P17844 614 aaKnown RBP5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 SDC1P18827 310 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 PRPS1L1P21108 318 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 FUT4P22083 530 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 MPIP34949 423 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 PTGER1P34995 402 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 HPCAL1P37235 193 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 ASMTP46597 345 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 CLCN2P51788 898 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 NCBP2P52298 156 aaKnown RBP eCLIP5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 SLC16A1P53985 500 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 DIO3P55073 304 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 POLE2P56282 527 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 CLDN8P56748 225 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 AP2B1P63010 937 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 ERVK-8P63133 956 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 IGLV3-21P80748 117 aaPredicted RBP5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 PLIN5Q00G26 463 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 PTGR1Q14914 329 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 SMU1Q2TAY7 513 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 PGS1Q32NB8 556 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 LSM12Q3MHD2 195 aaKnown RBP5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 CPTPQ5TA50 214 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 C6orf163Q5TEZ5 329 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 AGAP7PQ5VUJ5 663 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 PLAG1Q6DJT9 500 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 ANKRD26P1Q6NSI1 321 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 FAM111BQ6SJ93 734 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 EPGNQ6UW88 154 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 DGAT2L6Q6ZPD8 337 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 LINC00696Q6ZRV3 163 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 RGS9BPQ6ZS82 235 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 IKBIPQ70UQ0 350 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 LARP4Q71RC2 724 aaKnown RBP eCLIP5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 R3HCC1LQ7Z5L2 792 aaKnown RBP5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 SPATA19Q7Z5L4 167 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 APLFQ8IW19 511 aaPredicted RBP5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 KIF2BQ8N4N8 673 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 SIRT6Q8N6T7 355 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 EXD3Q8N9H8 876 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 FAM156AQ8NDB6 213 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 B3GNT7Q8NFL0 401 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 OR14A16Q8NHC5 309 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 CEP70Q8NHQ1 597 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 ACTRT2Q8TDY3 377 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 PTPMT1Q8WUK0 201 aaPredicted RBP5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 NCLNQ969V3 563 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 PPCDCQ96CD2 204 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 VMP1Q96GC9 406 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 SENP5Q96HI0 755 aaPredicted RBP5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 MAGED4Q96JG8 741 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 RILPQ96NA2 401 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 AGAP4Q96P64 663 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 FOXB1Q99853 325 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 PELOQ9BRX2 385 aaKnown RBP5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 DPY30Q9C005 99 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 LHPPQ9H008 270 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 CDCP1Q9H5V8 836 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 REEP4Q9H6H4 257 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 ZNF552Q9H707 407 aaPredicted RBP5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 MMP25Q9NPA2 562 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 SLC35C2Q9NQQ7 365 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 GPR83Q9NYM4 423 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 STMN3Q9NZ72 180 aa5.39□□□□□ -1.55
SCARNA6.1-201ENST00000516989 EHD3Q9NZN3 535 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms