RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 TMEM110Q86TL2 294 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 ARID3BQ8IVW6 561 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 LGI3Q8N145 548 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 SFRP1Q8N474 314 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 DNAAF3Q8N9W5 541 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 OR4F5Q8NH21 305 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 MUC7Q8TAX7 377 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 RUBCNQ92622 972 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 CREB3L1Q96BA8 519 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 ELMOD3Q96FG2 381 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 BMFQ96LC9 184 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 COG8Q96MW5 612 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 NEK1Q96PY6 1258 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 OR2A14Q96R47 310 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 RMDN3Q96TC7 470 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 SLC2A11Q9BYW1 496 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 FRMD8P1Q9BZ68 369 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 WWP1Q9H0M0 922 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 ACTL8Q9H568 366 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 LARSQ9P2J5 1176 aaKnown RBP-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 SARDHQ9UL12 918 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 MCTS1Q9ULC4 181 aaKnown RBP-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 CORO1CQ9ULV4 474 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 EXOC7Q9UPT5 735 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 PADI2Q9Y2J8 665 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 R4GN34 69 aa-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 BRD4O60885 1362 aaPredicted RBP-1.59□□□□□ -2.66
RNU6-542P-201ENST00000516405 VWA8A3KMH1 1905 aa-1.6□□□□□ -2.66
RNU6-542P-201ENST00000516405 ALPK3Q96L96 1907 aa-1.6□□□□□ -2.66
RNU6-542P-201ENST00000516405 IGHV7-81A0A0B4J1V7 117 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 A0A1W2PP18 115 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 ARHGEF35A5YM69 484 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 C9JVG2 144 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 H0YIG0 161 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 SGK1O00141 431 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 TAPBPO15533 448 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 P2RX6O15547 441 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 LCMT2O60294 686 aaKnown RBP-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 TNFSF13O75888 250 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 AKAP3O75969 853 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 SERPING1P05155 500 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 PNMA6AP0CW24 399 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 CALML3P27482 149 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 HPDP32754 393 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 ICAM3P32942 547 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 PGM1P36871 562 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 CXCL5P42830 114 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 GPC3P51654 580 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 CLDN17P56750 224 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 RPL32P62910 135 aaKnown RBP-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 RNASEH2BQ5TBB1 312 aaKnown RBP-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 STUMQ69YW2 141 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 TCEAL6Q6IPX3 200 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 APOOLQ6UXV4 268 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 MACC1Q6ZN28 852 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 OTOAQ7RTW8 1153 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 EGFL6Q8IUX8 553 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 MCOLN2Q8IZK6 566 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 TMEM252Q8N6L7 170 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 FBXL13Q8NEE6 735 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 NPBQ8NG41 125 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 C8orf46Q8TAG6 207 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 GPR148Q8TDV2 347 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 C20orf166-AS1Q96NR2 134 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 ZNF382Q96SR6 550 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 MAP7D2Q96T17 732 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 TXNDC17Q9BRA2 123 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 FUZQ9BT04 418 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 TM2D1Q9BX74 207 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 NUSAP1Q9BXS6 441 aaKnown RBP-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 RAB33BQ9H082 229 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 RIMS4Q9H426 269 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 MINDY3Q9H8M7 445 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 NEK6Q9HC98 313 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 UBE2TQ9NPD8 197 aaPredicted RBP-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 DEC1Q9P2X7 70 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 SEC14L4Q9UDX3 406 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 OR12D3Q9UGF7 316 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 ABT1Q9ULW3 272 aaKnown RBP-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 FAM50BQ9Y247 325 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 TRAPPC4Q9Y296 219 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 NCOR1O75376 2440 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 ANKRD30BQ9BXX2 1392 aa-1.6□□□□□ -2.67
RNU6-542P-201ENST00000516405 KMT2AQ03164 3969 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 ZBED9Q6R2W3 1325 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 A0A087WV62 115 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 SIGLEC16A6NMB1 481 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 C17orf105B2RV13 164 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 XKRYO14609 159 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 ATP6AP2O75787 350 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 GRAP2O75791 330 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 TOMM70O94826 608 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 AKR7A3O95154 331 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 CCNE2O96020 404 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 STSP08842 583 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 CHTF8P0CG12 524 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 TCF4P15884 667 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 PTBP1P26599 531 aaKnown RBP eCLIP-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 GP5P40197 560 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 PRPF4BQ13523 1007 aaKnown RBP-1.61□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms