RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 UFM1P61960 85 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 CACNG1Q06432 222 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 FOXM1Q08050 763 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 MERTKQ12866 999 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 ILKQ13418 452 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 OR8G1Q15617 311 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 PROX2Q3B8N5 592 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 ATAT1Q5SQI0 421 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 RIPPLY2Q5TAB7 128 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 DLEU7Q6UYE1 221 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 MBOAT1Q6ZNC8 495 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 SMIM15Q7Z3B0 74 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 SPATA19Q7Z5L4 167 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 DEFB128Q7Z7B8 93 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 PARP16Q8N5Y8 322 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 NAXEQ8NCW5 288 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 STOML3Q8TAV4 291 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 GLYATL2Q8WU03 294 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 NUDT8Q8WV74 236 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 ISG20Q96AZ6 181 aaKnown RBP7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 FBXO17Q96EF6 278 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 LRRC46Q96FV0 321 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 AMDHD1Q96NU7 426 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 ZNF385AQ96PM9 386 aaKnown RBP7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 ZNF382Q96SR6 550 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 DPH7Q9BTV6 452 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 ALOXE3Q9BYJ1 711 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 ACTL8Q9H568 366 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 NLGN3Q9NZ94 848 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 SLAMF8Q9P0V8 285 aa7.07□□□□□ -1.28
PDLIM5-219ENST00000514743 TGM5O43548 720 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 RECQL5O94762 991 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 IFNA2P01563 188 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 STAT5AP42229 794 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 ADPRHP54922 357 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 RHOAP61586 193 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 SMAD3P84022 425 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 MAB21L1Q13394 359 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 GK2Q14410 553 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 COL28A1Q2UY09 1125 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 ADPRMQ3LIE5 342 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 XAF1Q6GPH4 301 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 THOC6Q86W42 341 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 GPSM1Q86YR5 675 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 MCEMP1Q8IX19 187 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 FAM185AQ8N0U4 392 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 SLC39A11Q8N1S5 342 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 NAT16Q8N8M0 369 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 DCAF4L2Q8NA75 395 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 OR5T1Q8NG75 326 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 OR6K2Q8NGY2 324 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 DNAJB14Q8TBM8 379 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 PROKR1Q8TCW9 393 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 DYNC2LI1Q8TCX1 351 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 WFDC12Q8WWY7 111 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 ZNF689Q96CS4 500 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 CDCA3Q99618 268 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 SUCNR1Q9BXA5 334 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 YTHDF1Q9BYJ9 559 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 NKX6-2Q9C056 277 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 GAL3ST2Q9H3Q3 398 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 ELOVL2Q9NXB9 296 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 NUDT4Q9NZJ9 180 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 FBXL2Q9UKC9 423 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 NDRG2Q9UN36 371 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 USP22Q9UPT9 525 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 NCKAP1Q9Y2A7 1128 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 CDH23Q9H251 3354 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 TRBV5-4A0A0C4DH59 114 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 ANKRD28O15084 1053 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 TAPBPO15533 448 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 SLC22A3O75751 556 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 CRHP06850 196 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 TPOP07202 933 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 H2AFB1P0C5Y9 115 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 H2AFB2P0C5Z0 115 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 GKP32189 559 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 PITPNBP48739 271 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 NHLH2Q02577 135 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 TRAF3Q13114 568 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 VEZF1Q14119 521 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 PCBP2Q15366 365 aaKnown RBP eCLIP7.06□□□□□ -1.281e-6■■■■■ 81.2
PDLIM5-219ENST00000514743 RBBP7Q16576 425 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 TRIM60Q495X7 471 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 RABL3Q5HYI8 236 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 C6orf136Q5SQH8 315 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 TPRG1LQ5T0D9 272 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 AVPI1Q5T686 147 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 TXNDC8Q6A555 127 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 FDX2Q6P4F2 183 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 GOLGA7Q7Z5G4 137 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 TMEM17Q86X19 198 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 PTRH1Q86Y79 214 aaKnown RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 CBR4Q8N4T8 237 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 ARL14EPQ8N8R7 260 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 HJURPQ8NCD3 748 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 OR56A4Q8NGH8 313 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 ZNF431Q8TF32 576 aaPredicted RBP7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 AUTS2Q8WXX7 1259 aa7.06□□□□□ -1.28
PDLIM5-219ENST00000514743 RPL3LQ92901 407 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms