RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 ADOQ96SZ5 270 aa18.29■□□□□ 0.52
SQSTM1-215ENST00000514093 RBBP8Q99708 897 aa18.29■□□□□ 0.52
SQSTM1-215ENST00000514093 TRIM31Q9BZY9 425 aa18.29■□□□□ 0.52
SQSTM1-215ENST00000514093 TXNDC16Q9P2K2 825 aa18.29■□□□□ 0.52
SQSTM1-215ENST00000514093 ZNF639Q9UID6 485 aa18.29■□□□□ 0.52
SQSTM1-215ENST00000514093 MRPS18CQ9Y3D5 142 aaKnown RBP18.29■□□□□ 0.52
SQSTM1-215ENST00000514093 CR1P17927 2039 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 TP73O15350 636 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 PHF1O43189 567 aaPredicted RBP18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 KERAO60938 352 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 ERAL1O75616 437 aaKnown RBP18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 MTHFD2P13995 350 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 DRD5P21918 477 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 GRK2P25098 689 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 SSTR1P30872 391 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 PPICP45877 212 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 GPX6P59796 221 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 LTB4RQ15722 352 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 RAPH1Q70E73 1250 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 CMC1Q7Z7K0 106 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 WFDC8Q8IUA0 241 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 KLHL7Q8IXQ5 586 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 OR5M1Q8NGP8 315 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 AKAP1Q92667 903 aaKnown RBP eCLIP18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 CAVIN3Q969G5 261 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 REPS1Q96D71 796 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 RNF122Q9H9V4 155 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 CES1P1Q9UKY3 287 aa18.28■□□□□ 0.52
SQSTM1-215ENST00000514093 OR6C70A6NIJ9 312 aa18.27■□□□□ 0.52
SQSTM1-215ENST00000514093 CD5LO43866 347 aa18.27■□□□□ 0.52
SQSTM1-215ENST00000514093 DEKP35659 375 aaKnown RBP18.27■□□□□ 0.52
SQSTM1-215ENST00000514093 EMDP50402 254 aa18.27■□□□□ 0.52
SQSTM1-215ENST00000514093 RPS4XP62701 263 aaKnown RBP18.27■□□□□ 0.52
SQSTM1-215ENST00000514093 MRPS35P82673 323 aaKnown RBP18.27■□□□□ 0.52
SQSTM1-215ENST00000514093 PON3Q15166 354 aa18.27■□□□□ 0.52
SQSTM1-215ENST00000514093 ALKBH2Q6NS38 261 aa18.27■□□□□ 0.52
SQSTM1-215ENST00000514093 OR4K17Q8NGC6 315 aa18.27■□□□□ 0.52
SQSTM1-215ENST00000514093 CDK15Q96Q40 435 aa18.27■□□□□ 0.52
SQSTM1-215ENST00000514093 MRPL1Q9BYD6 325 aaKnown RBP18.27■□□□□ 0.52
SQSTM1-215ENST00000514093 ANKRA2Q9H9E1 313 aa18.27■□□□□ 0.52
SQSTM1-215ENST00000514093 NMRAL1Q9HBL8 299 aa18.27■□□□□ 0.52
SQSTM1-215ENST00000514093 PSD3Q9NYI0 1048 aa18.27■□□□□ 0.52
SQSTM1-215ENST00000514093 ZNF337Q9Y3M9 751 aa18.27■□□□□ 0.52
SQSTM1-215ENST00000514093 E7ESA3 106 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 FOXE1O00358 373 aaPredicted RBP18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 TO15178 435 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 TLX2O43763 284 aaPredicted RBP18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 TNFRSF21O75509 655 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 SEC31AO94979 1220 aaKnown RBP18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 ATP1B1P05026 303 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 PCSK2P16519 638 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 ACVR1BP36896 505 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 CLDN20P56880 219 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 PFKFB4Q16877 469 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 CHRFAM7AQ494W8 412 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 CCNYL2Q5T2Q4 361 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 RAET1LQ5VY80 246 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 SLC48A1Q6P1K1 146 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 NXNL1Q96CM4 212 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 SLC35A4Q96G79 324 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 SERPINI1Q99574 410 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 CPNE1Q99829 537 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 DSN1Q9H410 356 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 IPPKQ9H8X2 491 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 GPR55Q9Y2T6 319 aaPredicted RBP18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 PCDHA9Q9Y5H5 950 aa18.26■□□□□ 0.51
SQSTM1-215ENST00000514093 GOLGA6L10A6NI86 522 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 ABCB7O75027 752 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 TMCC2O75069 709 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 AQP8O94778 261 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 F12P00748 615 aaPredicted RBP18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 HK1P19367 917 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 IDUAP35475 653 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 CDKN1AP38936 164 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 GAS1P54826 345 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 DSCR4P56555 118 aaPredicted RBP18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 CORO7P57737 925 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 EEFSECP57772 596 aaKnown RBP18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 DR1Q01658 176 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 OCRLQ01968 901 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 ILF2Q12905 390 aaKnown RBP18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 GTF2H2Q13888 395 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 GUSBP1Q15486 140 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 PPP4R4Q6NUP7 873 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 GTF2H2CQ6P1K8 395 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 STAC2Q6ZMT1 411 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 FAM214BQ7L5A3 538 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 GOLGA7Q7Z5G4 137 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 SLC35F6Q8N357 371 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 RAB3IL1Q8TBN0 382 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 CDKL2Q92772 493 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 ZBED6CLQ96FA7 236 aaPredicted RBP18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 TMEM204Q9BSN7 226 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 PRODH2Q9UF12 536 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 CLEC4AQ9UMR7 237 aa18.25■□□□□ 0.51
SQSTM1-215ENST00000514093 H3BML4 177 aa18.24■□□□□ 0.51
SQSTM1-215ENST00000514093 TSPAN2O60636 221 aa18.24■□□□□ 0.51
SQSTM1-215ENST00000514093 SEMA3DO95025 777 aa18.24■□□□□ 0.51
SQSTM1-215ENST00000514093 SOD3P08294 240 aa18.24■□□□□ 0.51
SQSTM1-215ENST00000514093 LTA4HP09960 611 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms