RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 CLDN8P56748 225 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 ADORA2A-AS1P86434 159 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 OCRLQ01968 901 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 STX3Q13277 289 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 GAB1Q13480 694 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 PTGR1Q14914 329 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 SLC10A1Q14973 349 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 GALNTL6Q49A17 601 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 CYP27C1Q4G0S4 372 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 ATP6AP1LQ52LC2 224 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 C6orf163Q5TEZ5 329 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 PRAMEF20Q5VT98 475 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 OGFOD2Q6N063 350 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 SLC30A6Q6NXT4 461 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 TMEM107Q6UX40 140 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 R3HCC1LQ7Z5L2 792 aaKnown RBP8.89□□□□□ -0.99
RNF4-221ENST00000513643 FJX1Q86VR8 437 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 PRR22Q8IZ63 422 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 KIRREL3Q8IZU9 778 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 WDSUB1Q8N9V3 476 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 FAM13CQ8NE31 585 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 OR4N2Q8NGD1 307 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 CLHC1Q8NHS4 586 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 FAM110BQ8TC76 370 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 AGR3Q8TD06 166 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 PHF10Q8WUB8 498 aaKnown RBP8.89□□□□□ -0.99
RNF4-221ENST00000513643 NUDT8Q8WV74 236 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 ITLN2Q8WWU7 325 aaPredicted RBP8.89□□□□□ -0.99
RNF4-221ENST00000513643 DIO2Q92813 273 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 GFM2Q969S9 779 aaKnown RBP8.89□□□□□ -0.99
RNF4-221ENST00000513643 TMBIM1Q969X1 311 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 PPCDCQ96CD2 204 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 CCDC120Q96HB5 630 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 RILPQ96NA2 401 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 VKORC1Q9BQB6 163 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 DEFB127Q9H1M4 99 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 MEAF6Q9HAF1 191 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 PFDN4Q9NQP4 134 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 SIRT3Q9NTG7 399 aaPredicted RBP8.89□□□□□ -0.99
RNF4-221ENST00000513643 PNPOQ9NVS9 261 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 THAP1Q9NVV9 213 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 PLEKHB1Q9UF11 243 aaPredicted RBP8.89□□□□□ -0.99
RNF4-221ENST00000513643 TINAGQ9UJW2 476 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 PCDHGB3Q9Y5G1 929 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 LIPGQ9Y5X9 500 aa8.89□□□□□ -0.99
RNF4-221ENST00000513643 TACC2O95359 2948 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 TRGV8A0A0C4DH27 118 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 FAM166BA8MTA8 275 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 ACOT7O00154 380 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 CCL21O00585 134 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 ZNF195O14628 629 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 AKAP10O43572 662 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 FADS1O60427 444 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 ZG16O60844 167 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 ICOSLGO75144 302 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 COQ9O75208 318 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 SKAP2O75563 359 aaPredicted RBP8.88□□□□□ -0.99
RNF4-221ENST00000513643 NKX2-2O95096 273 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 LRATO95237 230 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 PRPS1L1P21108 318 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 MAPK1P28482 360 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 PTPN6P29350 595 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 NTSP30990 170 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 PTGS2P35354 604 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 CDK9P50750 372 aaKnown RBP8.88□□□□□ -0.99
RNF4-221ENST00000513643 PER3P56645 1201 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 WNT3P56703 355 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 NNATQ16517 81 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 GXYLT1Q4G148 440 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 NHSL2Q5HYW2 709 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 AP1ARQ63HQ0 302 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 TIGD3Q6B0B8 471 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 MTFR2Q6P444 385 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 LIX1Q8N485 282 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 MARVELD2Q8N4S9 558 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 KRTCAP2Q8N6L1 136 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 NATD1Q8N6N6 113 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 FNDC5Q8NAU1 212 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 OR7A2PQ8NGA2 310 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 OR5M3Q8NGP4 307 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 PPP1R14CQ8TAE6 165 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 TUBGCP3Q96CW5 907 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 ZBED6CLQ96FA7 236 aaPredicted RBP8.88□□□□□ -0.99
RNF4-221ENST00000513643 MAELQ96JY0 434 aaKnown RBP8.88□□□□□ -0.99
RNF4-221ENST00000513643 COL21A1Q96P44 957 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 DOHHQ9BU89 302 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 VIPAS39Q9H9C1 493 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 BOKQ9UMX3 212 aaPredicted RBP8.88□□□□□ -0.99
RNF4-221ENST00000513643 C15orf41Q9Y2V0 281 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 APCP25054 2843 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 EXPH5Q8NEV8 1989 aa8.88□□□□□ -0.99
RNF4-221ENST00000513643 FBN2P35556 2912 aa8.87□□□□□ -0.99
RNF4-221ENST00000513643 LRBAP50851 2863 aa8.87□□□□□ -0.99
RNF4-221ENST00000513643 NUP214P35658 2090 aaPredicted RBP8.87□□□□□ -0.99
RNF4-221ENST00000513643 SDHDO14521 159 aa8.87□□□□□ -0.99
RNF4-221ENST00000513643 SNPHO15079 494 aa8.87□□□□□ -0.99
RNF4-221ENST00000513643 PDE9AO76083 593 aa8.87□□□□□ -0.99
RNF4-221ENST00000513643 IL33O95760 270 aa8.87□□□□□ -0.99
RNF4-221ENST00000513643 ELAVL4P26378 380 aaKnown RBP8.87□□□□□ -0.99
RNF4-221ENST00000513643 RPL3P39023 403 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms