RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 PCDHGA12O60330 932 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 MITFO75030 526 aaPredicted RBP7.81□□□□□ -1.16
RNF4-220ENST00000513578 SEMA7AO75326 666 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 CLIC3O95833 236 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 CBX7O95931 251 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 ADAP00813 363 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 PDGFBP01127 241 aaPredicted RBP7.81□□□□□ -1.16
RNF4-220ENST00000513578 H1F0P07305 194 aaKnown RBP7.81□□□□□ -1.16
RNF4-220ENST00000513578 JUNBP17275 347 aaPredicted RBP7.81□□□□□ -1.16
RNF4-220ENST00000513578 NELFEP18615 380 aaKnown RBP7.81□□□□□ -1.16
RNF4-220ENST00000513578 CRHBPP24387 322 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 ALDH4A1P30038 563 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 TTKP33981 857 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 ESRRGP62508 458 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 CHRNEQ04844 493 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 CD47Q08722 323 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 FUT7Q11130 342 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 DGCR6Q14129 220 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 NR0B2Q15466 257 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 DUSP5Q16690 384 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 ZSWIM7Q19AV6 140 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 ZNF528Q3MIS6 628 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 ZNF311Q5JNZ3 666 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 MLIPQ5VWP3 458 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 NKAIN2Q5VXU1 208 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 TYW3Q6IPR3 259 aaKnown RBP7.81□□□□□ -1.16
RNF4-220ENST00000513578 TMEM71Q6P5X7 295 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 CD300LDQ6UXZ3 194 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 FRRS1Q6ZNA5 592 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 ALDH16A1Q8IZ83 802 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 OFCC1Q8IZS5 231 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 ZNF619Q8N2I2 560 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 SLC5A8Q8N695 610 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 OR4D11Q8NGI4 311 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 CNDP2Q96KP4 475 aaKnown RBP7.81□□□□□ -1.16
RNF4-220ENST00000513578 PRRC1Q96M27 445 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 NECAB3Q96P71 396 aaPredicted RBP7.81□□□□□ -1.16
RNF4-220ENST00000513578 YIPF4Q9BSR8 244 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 DGCR6LQ9BY27 220 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 SPRTNQ9H040 489 aaPredicted RBP7.81□□□□□ -1.16
RNF4-220ENST00000513578 ING2Q9H160 280 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 NMNAT1Q9HAN9 279 aaPredicted RBP7.81□□□□□ -1.16
RNF4-220ENST00000513578 PAPOLBQ9NRJ5 636 aaKnown RBP7.81□□□□□ -1.16
RNF4-220ENST00000513578 PLSCR2Q9NRY7 297 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 CUTCQ9NTM9 273 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 KLHL28Q9NXS3 571 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 KIF17Q9P2E2 1029 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 TMCC3Q9ULS5 477 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 ZNF232Q9UNY5 417 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 CLCA2Q9UQC9 943 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 EPG5Q9HCE0 2579 aa7.81□□□□□ -1.16
RNF4-220ENST00000513578 ASXL3Q9C0F0 2248 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 LY6G6EA0A0G2JKS1 128 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 SH3PXD2BA1X283 911 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 EME2A4GXA9 379 aaPredicted RBP7.8□□□□□ -1.16
RNF4-220ENST00000513578 AGAP5A6NIR3 686 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 J3KTA2 159 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 DSCR3O14972 297 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 KIAA0513O60268 411 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 STX11O75558 287 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 OR2B3O76000 313 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 ZIC2O95409 532 aaPredicted RBP7.8□□□□□ -1.16
RNF4-220ENST00000513578 ONECUT2O95948 504 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 DBIP07108 87 aaKnown RBP7.8□□□□□ -1.16
RNF4-220ENST00000513578 CT62P0C5K7 136 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 ELAVL4P26378 380 aaKnown RBP7.8□□□□□ -1.16
RNF4-220ENST00000513578 CSF2RBP32927 897 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 PTGER1P34995 402 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 GGT2P36268 569 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 POLR2IP36954 125 aaKnown RBP7.8□□□□□ -1.16
RNF4-220ENST00000513578 ARL4DP49703 201 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 PDX1P52945 283 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 TPD52P55327 224 aaPredicted RBP7.8□□□□□ -1.16
RNF4-220ENST00000513578 RPP38P78345 283 aaKnown RBP7.8□□□□□ -1.16
RNF4-220ENST00000513578 POU6F2P78424 691 aaPredicted RBP7.8□□□□□ -1.16
RNF4-220ENST00000513578 HPCAP84074 193 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 ALDH6A1Q02252 535 aaKnown RBP7.8□□□□□ -1.16
RNF4-220ENST00000513578 NHLH1Q02575 133 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 CSTF1Q05048 431 aaKnown RBP7.8□□□□□ -1.16
RNF4-220ENST00000513578 STX4Q12846 297 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 COX10Q12887 443 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 CDK5R2Q13319 367 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 RAPSNQ13702 412 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 LAPTM4AQ15012 233 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 LARS2Q15031 903 aaKnown RBP7.8□□□□□ -1.16
RNF4-220ENST00000513578 CTU2Q2VPK5 515 aaKnown RBP7.8□□□□□ -1.16
RNF4-220ENST00000513578 HLA-BQ31612 363 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 NADK2Q4G0N4 442 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 EIPR1Q53HC9 387 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 DCST1Q5T197 706 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 RNF220Q5VTB9 566 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 FOXB2Q5VYV0 432 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 LAIR2Q6ISS4 152 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 SLC23A3Q6PIS1 610 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 ZNF773Q6PK81 442 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 QSOX2Q6ZRP7 698 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 GALNT12Q8IXK2 581 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 PEX5LQ8IYB4 626 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 TAGAPQ8N103 731 aa7.8□□□□□ -1.16
RNF4-220ENST00000513578 VWA5B2Q8N398 1253 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms