RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 ZNF324O75467 553 aaPredicted RBP1.24□□□□□ -2.21
PDGFC-208ENST00000512711 CRCPO75575 148 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 GPX5O75715 221 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 TOXO94900 526 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 HSPA4LO95757 839 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 PGK2P07205 417 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 STIP1P31948 543 aaKnown RBP1.24□□□□□ -2.21
PDGFC-208ENST00000512711 PMELP40967 661 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 ST8SIA6P61647 398 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 CDKL1Q00532 357 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 ZNF45Q02386 682 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 PUDPQ08623 228 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 CLPPQ16740 277 aaPredicted RBP1.24□□□□□ -2.21
PDGFC-208ENST00000512711 CDC42EP5Q6NZY7 148 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 CD164L2Q6UWJ8 174 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 PET117Q6UWS5 81 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 CXCL17Q6UXB2 119 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 CLEC4GQ6UXB4 293 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 MSANTD1Q6ZTZ1 278 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 HOOK3Q86VS8 718 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 ERICH1Q86X53 443 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 SIAH3Q8IW03 269 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 CCDC71LQ8N9Z2 235 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 BBS1Q8NFJ9 593 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 RDH11Q8TC12 318 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 ARNTL2Q8WYA1 636 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 ACCSQ96QU6 501 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 MLPHQ9BV36 600 aaPredicted RBP1.24□□□□□ -2.21
PDGFC-208ENST00000512711 DNAJC17Q9NVM6 304 aaKnown RBP1.24□□□□□ -2.21
PDGFC-208ENST00000512711 ZNF223Q9UK11 482 aaPredicted RBP1.24□□□□□ -2.21
PDGFC-208ENST00000512711 RAD54L2Q9Y4B4 1467 aa1.24□□□□□ -2.21
PDGFC-208ENST00000512711 PARD3Q8TEW0 1356 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 THSD7BQ9C0I4 1608 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 SUPT7LO94864 414 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 IGSF6O95976 241 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 PGK1P00558 417 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 CTRLP40313 264 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 SERPINH1P50454 418 aaKnown RBP1.23□□□□□ -2.21
PDGFC-208ENST00000512711 SMSP52788 366 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 GEMP55040 296 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 TSPY1Q01534 308 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 EIF4EBP1Q13541 118 aaPredicted RBP1.23□□□□□ -2.21
PDGFC-208ENST00000512711 SMC1AQ14683 1233 aaKnown RBP1.23□□□□□ -2.21
PDGFC-208ENST00000512711 GPNMBQ14956 572 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 SHHQ15465 462 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 CAMK4Q16566 473 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 MEP1BQ16820 701 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 ANKRD20A4Q4UJ75 823 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 ANKRD20A8PQ5CZ79 823 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 OR2B11Q5JQS5 317 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 ANKRD20A2Q5SQ80 823 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 LGSNQ5TDP6 509 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 ANKRD20A1Q5TYW2 823 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 ANKRD20A3Q5VUR7 823 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 CYB5R2Q6BCY4 276 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 ASRGL1Q7L266 308 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 HSD17B13Q7Z5P4 300 aaPredicted RBP1.23□□□□□ -2.21
PDGFC-208ENST00000512711 H1FOOQ8IZA3 346 aaPredicted RBP1.23□□□□□ -2.21
PDGFC-208ENST00000512711 CSNK1A1LQ8N752 337 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 RDH5Q92781 318 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 DLX4Q92988 240 aaPredicted RBP1.23□□□□□ -2.21
PDGFC-208ENST00000512711 HAVCR1Q96D42 359 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 RPGRIP1Q96KN7 1286 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 GPR137Q96N19 417 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 CITED2Q99967 270 aaPredicted RBP1.23□□□□□ -2.21
PDGFC-208ENST00000512711 DDX50Q9BQ39 737 aaKnown RBP1.23□□□□□ -2.21
PDGFC-208ENST00000512711 NICN1Q9BSH3 213 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 APOOQ9BUR5 198 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 UTP14AQ9BVJ6 771 aaKnown RBP1.23□□□□□ -2.21
PDGFC-208ENST00000512711 PTGES2Q9H7Z7 377 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 MAGEF1Q9HAY2 307 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 VPS54Q9P1Q0 977 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 ITM2BQ9Y287 266 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 WSB1Q9Y6I7 421 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 USP6P35125 1406 aa1.23□□□□□ -2.21
PDGFC-208ENST00000512711 IGKV2-28A0A075B6P5 120 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 A4D1N5 150 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 ABCD4O14678 606 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 HTATSF1O43719 755 aaKnown RBP1.22□□□□□ -2.21
PDGFC-208ENST00000512711 IGKV2D-28P01615 120 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 SEMG1P04279 462 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 CD5P06127 495 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 SCG2P13521 617 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 GABRR1P24046 479 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 FCARP24071 287 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 CD1BP29016 333 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 EGFEM1PQ0D2K5 195 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 ELAVL3Q14576 367 aaKnown RBP1.22□□□□□ -2.21
PDGFC-208ENST00000512711 PRAMEF8Q5VWM4 474 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 FRA10AC1Q70Z53 315 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 PYROXD2Q8N2H3 581 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 RNASE8Q8TDE3 154 aaKnown RBP1.22□□□□□ -2.21
PDGFC-208ENST00000512711 DCUN1D4Q92564 292 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 MYDGFQ969H8 173 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 RAB39BQ96DA2 213 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 NLNQ9BYT8 704 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 EDEM3Q9BZQ6 932 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 NAPBQ9H115 298 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 GLT8D2Q9H1C3 349 aa1.22□□□□□ -2.21
PDGFC-208ENST00000512711 EXOSC3Q9NQT5 275 aaKnown RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms