RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 SLAMF1Q13291 335 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 ELAVL3Q14576 367 aaKnown RBP8.49□□□□□ -1.05
VCAN-208ENST00000512590 SFRP5Q5T4F7 317 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 MUC15Q8N387 334 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 OR5H2Q8NGV7 314 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 C9orf43Q8TAL5 461 aaPredicted RBP8.49□□□□□ -1.05
VCAN-208ENST00000512590 ACMSDQ8TDX5 336 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 GEMIN6Q8WXD5 167 aaKnown RBP8.49□□□□□ -1.05
VCAN-208ENST00000512590 HBEGFQ99075 208 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 AGAP2Q99490 1192 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 PIP5K1AQ99755 562 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 AMBRA1Q9C0C7 1298 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 RNF38Q9H0F5 515 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 RXFP3Q9NSD7 469 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 KLHL21Q9UJP4 597 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 FABP12A6NFH5 140 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 NCBP2LA6PVI3 153 aaKnown RBP8.49□□□□□ -1.05
VCAN-208ENST00000512590 TGDSO95455 350 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 P2RY2P41231 377 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 DCST2Q5T1A1 773 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 ZNF367Q7RTV3 350 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 ZNF417Q8TAU3 575 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 PIWIL2Q8TC59 973 aaKnown RBP8.49□□□□□ -1.05
VCAN-208ENST00000512590 HPS1Q92902 700 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 ZNF75AQ96N20 296 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 SLC2A13Q96QE2 648 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 ZNF587Q96SQ5 575 aaPredicted RBP8.49□□□□□ -1.05
VCAN-208ENST00000512590 NDFIP1Q9BT67 221 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 TSSK6Q9BXA6 273 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 OR51B5Q9H339 312 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 FLRT1Q9NZU1 646 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 SLC23A2Q9UGH3 650 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 MGAT4BQ9UQ53 548 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.49□□□□□ -1.05
VCAN-208ENST00000512590 SEC14L6B5MCN3 397 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 TISP43B9A030 160 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 PDLIM1O00151 329 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 CXCR6O00574 342 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 SOCS7O14512 581 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 TLX2O43763 284 aaPredicted RBP8.49□□□□□ -1.05
VCAN-208ENST00000512590 TMEM63AO94886 807 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 SERPINA5P05154 406 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 IQCF3P0C7M6 154 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 PRPS1L1P21108 318 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 AZGP1P25311 298 aaKnown RBP8.49□□□□□ -1.05
VCAN-208ENST00000512590 CATR1Q13166 79 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 MSMO1Q15800 293 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 NTRK3Q16288 839 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 SLC36A2Q495M3 483 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 OR52E8Q6IFG1 317 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 AMIGO2Q86SJ2 522 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 SCAMP5Q8TAC9 235 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 FRZBQ92765 325 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 OSTF1Q92882 214 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 AKR1E2Q96JD6 320 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 CTRCQ99895 268 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 ANKRA2Q9H9E1 313 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 PCDHGA9Q9Y5G4 932 aaKnown RBP8.49□□□□□ -1.05
VCAN-208ENST00000512590 TRBC2A0A5B9 178 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 A6NIZ1 184 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 ZNF785A8K8V0 405 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 CENPBD1B2RD01 187 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 DVL2O14641 736 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 OPN1LWP04000 364 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 PRSS56P0CW18 603 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 SLC9A3P48764 834 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 RAP1BP61224 184 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 RAP1AP62834 184 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 MPP1Q00013 466 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 RAB35Q15286 201 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 PDLIM3Q53GG5 364 aaPredicted RBP8.49□□□□□ -1.05
VCAN-208ENST00000512590 TMPRSS11FQ6ZWK6 438 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 SLCO6A1Q86UG4 719 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 SARAFQ96BY9 339 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 HERC2P3Q9BVR0 1158 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 NXT1Q9UKK6 140 aaKnown RBP8.49□□□□□ -1.05
VCAN-208ENST00000512590 COPS3Q9UNS2 423 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 OR1A2Q9Y585 309 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 PCDHGB6Q9Y5F9 930 aa8.49□□□□□ -1.05
VCAN-208ENST00000512590 UNC119BA6NIH7 251 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 APOL3O95236 402 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 ACVR1BP36896 505 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 PPP2CAP67775 309 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 ZFP69Q49AA0 526 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 UBE2NLQ5JXB2 153 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 MCATQ8IVS2 390 aaKnown RBP8.48□□□□□ -1.05
VCAN-208ENST00000512590 OR10AD1Q8NGE0 317 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 OR5B17Q8NGF7 314 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 OR10A6Q8NH74 314 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 FAM174AQ8TBP5 190 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 ZNF675Q8TD23 568 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 DOK4Q8TEW6 326 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 TRMT2BQ96GJ1 504 aaKnown RBP8.48□□□□□ -1.05
VCAN-208ENST00000512590 DPH7Q9BTV6 452 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 POLR2J2Q9GZM3 115 aaKnown RBP8.48□□□□□ -1.05
VCAN-208ENST00000512590 TAS2R10Q9NYW0 307 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 CDH22Q9UJ99 828 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 ZNF587BE7ETH6 402 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 DLL1O00548 723 aa8.48□□□□□ -1.05
VCAN-208ENST00000512590 AQP9O43315 295 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms